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  1. The oomycete Aphanomyces astaci is regarded as the causative agent of crayfish plague and represents an evident hazard for European crayfish species. Native crayfish populations infected with this pathogen suffer...

    Authors: Gerald Hochwimmer, Reinhard Tober, Renè Bibars-Reiter, Elisabeth Licek and Ralf Steinborn
    Citation: BMC Microbiology 2009 9:184
  2. Debaryomyces hansenii is one of the most salt tolerant species of yeast and has become a model organism for the study of tolerance mechanisms against salinity. The goal of this study was to identify key upregulat...

    Authors: Hsiu-fung Chao, Yung-fu Yen and Maurice SB Ku
    Citation: BMC Microbiology 2009 9:182
  3. Pectobacterium carotovorum subsp. carotovorum is a phytopathogenic enterobacterium responsible for soft rot, a disease characterized by extensive maceration of the affected plant tissue. This species also produce...

    Authors: Yung-chieh Chan, Huang-Pin Wu and Duen-yau Chuang
    Citation: BMC Microbiology 2009 9:181
  4. Although bacteria are implicated in the pathogenesis of chronic inflammatory bowel diseases (IBD), mechanisms of intestinal injury and immune activation remain unclear. Identification of adherent-invasive Escheri...

    Authors: Eytan Wine, Juan C Ossa, Scott D Gray-Owen and Philip M Sherman
    Citation: BMC Microbiology 2009 9:180
  5. Pathogenic yersiniae, including Y. pestis, share a type III secretion system (T3SS) that is composed of a secretion machinery, a set of translocation proteins, a control system, and six Yop effector proteins incl...

    Authors: Lingjun Zhan, Lei Yang, Lei Zhou, Yingli Li, He Gao, Zhaobiao Guo, Lianfeng Zhang, Chuan Qin, Dongsheng Zhou and Ruifu Yang
    Citation: BMC Microbiology 2009 9:178
  6. Aspergillus fumigatus is the most common agent of invasive aspergillosis, a feared complication in severely immunocompromised patients. Despite the recent commercialisation of new antifungal drugs, the prognosis ...

    Authors: Marc Pihet, Patrick Vandeputte, Guy Tronchin, Gilles Renier, Patrick Saulnier, Sonia Georgeault, Romain Mallet, Dominique Chabasse, Françoise Symoens and Jean-Philippe Bouchara
    Citation: BMC Microbiology 2009 9:177
  7. Glucose is the preferred carbon and energy source for Bacillus subtilis and Escherichia coli. A complex regulatory network coordinates gene expression, transport and enzymatic activities, in response to the prese...

    Authors: Carlos Daniel Vázquez, Julio A Freyre-González, Guillermo Gosset, José Antonio Loza and Rosa María Gutiérrez-Ríos
    Citation: BMC Microbiology 2009 9:176
  8. The incidence of gastric cancer differs among countries in Asia, and it has been suggested that virulence factors associated with Helicobacter pylori are partly responsible. The aim of this study was to investiga...

    Authors: Tomohisa Uchida, Lam Tung Nguyen, Akiko Takayama, Tadayoshi Okimoto, Masaaki Kodama, Kazunari Murakami, Takeshi Matsuhisa, Tuan Dung Trinh, Long Ta, Dang Quy Dung Ho, Hoa Hai Hoang, Tetsuko Kishida, Toshio Fujioka, Masatsugu Moriyama and Yoshio Yamaoka
    Citation: BMC Microbiology 2009 9:175
  9. Phosphorus deficiency is a major constraint to crop production due to rapid binding of the applied phosphorus into fixed forms not available to the plants. Microbial solubilization of inorganic phosphates has ...

    Authors: Pratibha Vyas and Arvind Gulati
    Citation: BMC Microbiology 2009 9:174
  10. The fungus Colletotrichum gloeosporioides f. sp. aeschynomene produces high levels of indole-3-acetic acid (IAA) in axenic cultures and during plant infection. We generated a suppression subtractive hybridization...

    Authors: Véronique Chagué, Rudy Maor and Amir Sharon
    Citation: BMC Microbiology 2009 9:173
  11. Actinobacillus pleuropneumoniae is the causative agent of porcine contagious pleuropneumonia, a highly contagious respiratory infection in pigs, and all the 15 serotypes are able to cause disease. Current vaccine...

    Authors: Yonghong Liao, Junhua Deng, Anding Zhang, Mingguang Zhou, Yong Hu, Huanchun Chen and Meilin Jin
    Citation: BMC Microbiology 2009 9:172
  12. Escherichia coli have been found in increased numbers in tissues from patients with Inflammatory Bowel Disease (IBD) and adherent-invasive E. coli have been found in resected ileum from patients with Crohn's dise...

    Authors: Andreas M Petersen, Eva M Nielsen, Eva Litrup, Jørn Brynskov, Hengameh Mirsepasi and Karen A Krogfelt
    Citation: BMC Microbiology 2009 9:171
  13. Pathogens tolerate stress conditions that include low pH, oxidative stress, high salt and high temperature in order to survive inside and outside their hosts. Lipopolysaccharide (LPS), which forms the outer-le...

    Authors: Verena Karsten, Sean R Murray, Jeremy Pike, Kimberly Troy, Martina Ittensohn, Manvel Kondradzhyan, K Brooks Low and David Bermudes
    Citation: BMC Microbiology 2009 9:170
  14. Bacteriophages can be successfully applied to treat infections caused by antibiotic-resistant bacteria. Until now no attempts have been undertaken to treat infections in immunosuppressed patients with phages. ...

    Authors: Michał Zimecki, Jolanta Artym, Maja Kocięba, Beata Weber-Dąbrowska, Jan Borysowski and Andrzej Górski
    Citation: BMC Microbiology 2009 9:169
  15. It has long been recognized that Klebsiella pneumoniae can grow anaerobically on citrate. Genes responsible for citrate fermentation of K. pneumoniae were known to be located in a 13-kb gene cluster on the chromo...

    Authors: Ying-Tsong Chen, Tsai-Lien Liao, Keh-Ming Wu, Tsai-Ling Lauderdale, Jing-Jou Yan, I-Wen Huang, Min-Chi Lu, Yi-Chyi Lai, Yen-Ming Liu, Hung-Yu Shu, Jin-Town Wang, Ih-Jen Su and Shih-Feng Tsai
    Citation: BMC Microbiology 2009 9:168
  16. Amino acid substitutions in the target enzyme Erg11p of azole antifungals contribute to clinically-relevant azole resistance in Candida albicans. A simple molecular method for rapid detection of ERG11 gene mutati...

    Authors: Huiping Wang, Fanrong Kong, Tania C Sorrell, Bin Wang, Paul McNicholas, Namfon Pantarat, David Ellis, Meng Xiao, Fred Widmer and Sharon CA Chen
    Citation: BMC Microbiology 2009 9:167
  17. L-arabitol dehydrogenase (LAD) and xylitol dehydrogenase (XDH) are involved in the degradation of L-arabinose and D-xylose, which are among the most abundant monosaccharides on earth. Previous data demonstrate...

    Authors: Lucy Rutten, Cecile Ribot, Blanca Trejo-Aguilar, Han AB Wösten and Ronald P de Vries
    Citation: BMC Microbiology 2009 9:166
  18. The Human Immunodeficiency Virus type one (HIV-1) is the major causing pathogen of the Acquired Immune Deficiency Syndrome (AIDS). A large number of HIV-1-related studies are based on three non-human model ani...

    Authors: Fan-Kai Lin, Chia-Lin Pan, Jinn-Moon Yang, Trees-Juen Chuang and Feng-Chi Chen
    Citation: BMC Microbiology 2009 9:164
  19. The salivary mucin MUC7 (previously known as MG2) can adhere to various strains of streptococci that are primary colonizers and predominant microorganisms of the oral cavity. Although there is a growing intere...

    Authors: Mehmet Kesimer, Nedret Kiliç, Ravi Mehrotra, David J Thornton and John K Sheehan
    Citation: BMC Microbiology 2009 9:163
  20. Clostridium perfringens is a medically important clostridial pathogen causing diseases in man and animals. To invade, multiply and colonize tissues of the host, a pathogen must be able to evade host immune system...

    Authors: Syed Imteyaz Alam, Sunita Bansod, Ravi Bhushan Kumar, Nabonita Sengupta and Lokendra Singh
    Citation: BMC Microbiology 2009 9:162
  21. During the course of a bacterial infection, the rapid identification of the causative agent(s) is necessary for the determination of effective treatment options. We have developed a method based on a modified ...

    Authors: Anna-Kaarina Järvinen, Sanna Laakso, Pasi Piiparinen, Anne Aittakorpi, Merja Lindfors, Laura Huopaniemi, Heli Piiparinen and Minna Mäki
    Citation: BMC Microbiology 2009 9:161
  22. Campylobacter jejuni is a gastrointestinal pathogen of humans, but part of the normal flora of poultry, and therefore grows well at the respective body temperatures of 37°C and 42°C. Proteomic studies on temperat...

    Authors: Kimberly M Rathbun, Johanna E Hall and Stuart A Thompson
    Citation: BMC Microbiology 2009 9:160
  23. Mycobacterium avium includes the subspecies avium, silvaticum, paratuberculosis and hominissuis, and M. avium subspecies has been isolated from various environments all over the world including from biofilms in w...

    Authors: Tone Bjordal Johansen, Angelika Agdestein, Ingrid Olsen, Sigrun Fredsvold Nilsen, Gudmund Holstad and Berit Djønne
    Citation: BMC Microbiology 2009 9:159
  24. The hemibiotrophic fungus Moniliophthora perniciosa is the causal agent of Witches' broom, a disease of Theobroma cacao. The pathogen life cycle ends with the production of basidiocarps in dead tissues of the inf...

    Authors: Acássia BL Pires, Karina P Gramacho, Delmira C Silva, Aristóteles Góes-Neto, Mylene M Silva, Jairo S Muniz-Sobrinho, Ricardo F Porto, Cristiano Villela-Dias, Martin Brendel, Júlio CM Cascardo and Gonçalo AG Pereira
    Citation: BMC Microbiology 2009 9:158
  25. Streptomyces coelicolor is the most studied Streptomyces species and an excellent model for studying differentiation and antibiotic production. To date, many genes have been identified to be required for its diff...

    Authors: Pengfei Xie, Ana Zeng and Zhongjun Qin
    Citation: BMC Microbiology 2009 9:157
  26. Klebsiella pneumoniae is a capsulated Gram negative bacterial pathogen and a frequent cause of nosocomial infections. Despite its clinical relevance, little is known about the features of the interaction between

    Authors: Victoria Cano, David Moranta, Enrique Llobet-Brossa, José Antonio Bengoechea and Junkal Garmendia
    Citation: BMC Microbiology 2009 9:156
  27. With the exception of M. tuberculosis, little has been published on the problems of cross-contamination in bacteriology laboratories. We performed a retrospective analysis of subtyping data from the National Salm...

    Authors: Niall De Lappe, Jean O Connor, Geraldine Doran, Genevieve Devane and Martin Cormican
    Citation: BMC Microbiology 2009 9:155
  28. Functional screens based on dsRNA-mediated gene silencing identified several Anopheles gambiae genes that limit Plasmodium berghei infection. However, some of the genes identified in these screens have no effect ...

    Authors: Giovanna Jaramillo-Gutierrez, Janneth Rodrigues, Georges Ndikuyeze, Michael Povelones, Alvaro Molina-Cruz and Carolina Barillas-Mury
    Citation: BMC Microbiology 2009 9:154
  29. Salmonella enterica serovar Enteritidis (SE) colonizes the ovary and oviduct of chickens without causing overt clinical signs which can lead to SE-contamination of the content and membrane of shell-eggs as well a...

    Authors: Katie L Ebers, C Yan Zhang, M Zhenyu Zhang, R Hartford Bailey and Shuping Zhang
    Citation: BMC Microbiology 2009 9:153
  30. Acquiring a highly stable photonic plasmid in transformed Salmonella Typhimurium for use in biophotonic studies of bacterial tracking in vivo is critical to experimental paradigm development. The objective of thi...

    Authors: Keesla Moulton, Peter Ryan, Donald Lay and Scott Willard
    Citation: BMC Microbiology 2009 9:152
  31. The development of a new cold-active β-D-galactosidases and microorganisms that efficiently ferment lactose is of high biotechnological interest, particularly for lactose removal in milk and dairy products at ...

    Authors: Piotr Hildebrandt, Marta Wanarska and Józef Kur
    Citation: BMC Microbiology 2009 9:151
  32. The surface of polymeric tracheotomy tubes is a favourable environment for biofilm formation and therefore represents a potential risk factor for the development of pneumonia after tracheotomy. The aim of this in...

    Authors: Michaela Zumtobel, Ojan Assadian, Matthias Leonhard, Maria Stadler and Berit Schneider
    Citation: BMC Microbiology 2009 9:150
  33. Methanogenic Archaea play key metabolic roles in anaerobic ecosystems, where they use H2 and other substrates to produce methane. Methanococcus maripaludis is a model for studies of the global response to nutrien...

    Authors: Qiangwei Xia, Tiansong Wang, Erik L Hendrickson, Thomas J Lie, Murray Hackett and John A Leigh
    Citation: BMC Microbiology 2009 9:149
  34. The Double-Layer Agar (DLA) technique is extensively used in phage research to enumerate and identify phages and to isolate mutants and new phages. Many phages form large and well-defined plaques that are easi...

    Authors: Sílvio B Santos, Carla M Carvalho, Sanna Sillankorva, Ana Nicolau, Eugénio C Ferreira and Joana Azeredo
    Citation: BMC Microbiology 2009 9:148
  35. Enteropathogenic Escherichia coli (EPEC) produce attaching/effacing (A/E) lesions on eukaryotic cells mediated by the outer membrane adhesin intimin. EPEC are sub-grouped into typical (tEPEC) and atypical (aEPEC)...

    Authors: Denise Yamamoto, Rodrigo T Hernandes, Miguel Blanco, Lilo Greune, M Alexander Schmidt, Sylvia M Carneiro, Ghizlane Dahbi, Jesús E Blanco, Azucena Mora, Jorge Blanco and Tânia AT Gomes
    Citation: BMC Microbiology 2009 9:146

    The Erratum to this article has been published in BMC Microbiology 2009 9:235

  36. Since 1994, Brucella strains have been isolated from a wide range of marine mammals. They are currently recognized as two new Brucella species, B. pinnipedialis for the pinniped isolates and B. ceti for the cetac...

    Authors: Marianne Maquart, Philippe Le Flèche, Geoffrey Foster, Morten Tryland, Françoise Ramisse, Berit Djønne, Sascha Al Dahouk, Isabelle Jacques, Heinrich Neubauer, Karl Walravens, Jacques Godfroid, Axel Cloeckaert and Gilles Vergnaud
    Citation: BMC Microbiology 2009 9:145
  37. Bovine tuberculosis (BTB), caused by Mycobacterium bovis, has remained a major source of concern to public health officials in Zambia. Previous investigations have used traditional epidemiological methods that ar...

    Authors: Musso Munyeme, Leen Rigouts, Isdore Chola Shamputa, John Bwalya Muma, Morten Tryland, Eystein Skjerve and Berit Djønne
    Citation: BMC Microbiology 2009 9:144
  38. Symbiotic N2 fixation in legumes is constrained by many factors, including the paucity of suitable soil rhizobia To maximise growth of legume species therefore often requires the application of effective rhizo...

    Authors: Amy C Spriggs and Felix D Dakora
    Citation: BMC Microbiology 2009 9:142
  39. Among the members of the genus Bordetella B. petrii is unique, since it is the only species isolated from the environment, while the pathogenic Bordetellae are obligately associated with host organisms. Another f...

    Authors: Melanie Lechner, Karin Schmitt, Susanne Bauer, David Hot, Christine Hubans, Erwan Levillain, Camille Locht, Yves Lemoine and Roy Gross
    Citation: BMC Microbiology 2009 9:141
  40. Surface waters quality has declined in developing countries due to rapid industrialization and population growth. The microbiological quality of river Ganga, a life-sustaining surface water resource for large ...

    Authors: Pushpa Lata, Siya Ram, Madhoolika Agrawal and Rishi Shanker
    Citation: BMC Microbiology 2009 9:140
  41. Mycoplasma genitalium is an emerging sexually transmitted pathogen that has been associated with significant reproductive tract inflammatory syndromes in women. In addition, the strong association between severit...

    Authors: Chris L McGowin, Vsevolod L Popov and Richard B Pyles
    Citation: BMC Microbiology 2009 9:139
  42. All human pathogenic Yersinia species share a virulence-associated type III secretion system that translocates Yersinia effector proteins into host cells to counteract infection-induced signaling responses and pr...

    Authors: Georgia Vlahou, Oxana Schmidt, Bettina Wagner, Handan Uenlue, Petra Dersch, Francisco Rivero and Barbara A Weissenmayer
    Citation: BMC Microbiology 2009 9:138
  43. Genes orthologous to the ybaB loci of Escherichia coli and Haemophilus influenzae are widely distributed among eubacteria. Several years ago, the three-dimensional structures of the YbaB orthologs of both E. coli

    Authors: Anne E Cooley, Sean P Riley, Keith Kral, M Clarke Miller, Edward DeMoll, Michael G Fried and Brian Stevenson
    Citation: BMC Microbiology 2009 9:137
  44. Contamination of endoscopy equipment by Helicobacter pylori (H. pylori) frequently occurs after endoscopic examination of H. pylori-infected patients. In the hospital, manual pre-cleaning and soaking in glutarald...

    Authors: Hung-Chuan Chiu, Tzu-Lung Lin, Jyh-Chin Yang and Jin-Town Wang
    Citation: BMC Microbiology 2009 9:136
  45. The positive antimicrobial effects of increasing concentrations of thiocyanate (SCN-) and H2O2 on the human peroxidase defence system are well known. However, little is known about the quantitative efficacy of th...

    Authors: A Welk, Ch Meller, R Schubert, Ch Schwahn, A Kramer and H Below
    Citation: BMC Microbiology 2009 9:134

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