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Table 3 Important species differentiating CG and CGA

From: Microbiome signatures associated with clinical stages of gastric Cancer: whole metagenome shotgun sequencing study

 

MaAsLin

Random Forest VIMP

Species

Beta

SE

Pvalue

VIMP score

95% CI

Bacteroides_caccae

2.43

0.891

0.008

2.543

0.905–4.182

Bifidobacterium_longum

−1.8

0.669

0.009

1.988

0.315–3.661

Bifidobacterium_dentium

0.688

0.265

0.012

1.249

0.522–1.976

Streptococcus_anginosus

1.18

0.473

0.015

3.966

3.802–4.850

Coprococcus_catus

0.36

0.147

0.017

1.081

0.746–1.416

Lactobacillus_fermentum

1.36

0.569

0.020

2.230

1.578–2.883

Parabacteroides_distasonis

1.36

0.577

0.022

2.135

0.769–3.502

Enterococcus_faecium

−0.576

0.253

0.026

1.272

0.792–1.753

Lachnospiraceae_bacterium

_5_1_63FAA

−0.786

0.35

0.028

0.556

0.300–0.812

Oscillibacter_unclassified

1.33

0.621

0.036

2.012

0.954–3.071

Lactobacillus_mucosae

0.406

0.194

0.040

0.906

0.425–1.387