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Table 1 Definitions of sample abbreviations

From: Spotting disease disrupts the microbiome of infected purple sea urchins, Strongylocentrotus purpuratus

Group

Sample abbreviation

Definition of abbreviations

Sample type

LS

D1LS

Diseased sea urchin 1 lesion surface

Swab

 

D2aLS

Diseased sea urchin 2 lesion a - lesion surface

Swab

 

D2bLS

Diseased sea urchin 2 lesion b - lesion surface

Swab

 

D3LS

Diseased sea urchin 3 lesion surface

Swab

 

D4LS

Diseased sea urchin 4 lesion surface

Swab

LBW

D1LBW1

Diseased sea urchin 1 lesioned body wall

Dissected tissue

 

D1LBW2

Diseased sea urchin 1 lesioned body wall (replicate)

Dissected tissue

 

D2aLBW1

Diseased sea urchin 2 lesion a - lesioned body wall

Dissected tissue

 

D2aLBW2

Diseased sea urchin 2 lesion a - lesioned body wall (replicate)

Dissected tissue

 

D2bLBW1

Diseased sea urchin 2 lesion b - lesioned body wall

Dissected tissue

 

D2bLBW2

Diseased sea urchin 2 lesion b - lesioned body wall (replicate)

Dissected tissue

 

D3LBW

Diseased sea urchin 3 lesioned body wall

Dissected tissue

DBW

D1BW1

Diseased sea urchin 1 non-lesioned body wall

Dissected tissue

 

D1BW2

Diseased sea urchin 1 non-lesioned body wall (replicate)

Dissected tissue

 

D2BW1

Diseased sea urchin 2 non-lesioned body wall

Dissected tissue

 

D2BW2

Diseased sea urchin 2 non-lesioned body wall (replicate)

Dissected tissue

 

D3BW1

Diseased sea urchin 3 non-lesioned body wall

Dissected tissue

 

D3BW2

Diseased sea urchin 3 non-lesioned body wall (replicate)

Dissected tissue

DCF

D1CF

Diseased sea urchin 1 coelomic fluid

Coelomic fluid

 

D2CF

Diseased sea urchin 2 coelomic fluid

Coelomic fluid

 

D3CF

Diseased sea urchin 3 coelomic fluid

Coelomic fluid

HBW

H1BW1

Healthy sea urchin 1 non-lesioned body wall

Dissected tissue

 

H1BW2

Healthy sea urchin 1 non-lesioned body wall (replicate)

Dissected tissue

 

H2BW1

Healthy sea urchin 2 non-lesioned body wall

Dissected tissue

 

H2BW2

Healthy sea urchin 2 non-lesioned body wall (replicate)

Dissected tissue

 

H3BW1

Healthy sea urchin 3 non-lesioned body wall

Dissected tissue

 

H3BW2

Healthy sea urchin 3 non-lesioned body wall (replicate)

Dissected tissue

HCF

H1CF

Healthy sea urchin 1 coelomic fluid

Coelomic fluid

 

H2CF

Healthy sea urchin 2 coelomic fluid

Coelomic fluid

 

H3CF

Healthy sea urchin 3 coelomic fluid

Coelomic fluid

Controls

fSW1

500 ml filtered seawater from aquarium B

Aquarium seawater

 

fSW2

500 ml filtered seawater from aquarium B

Aquarium seawater

 

foSW

500 ml filtered Omega seawater

Seawater

 

sSW

Swab of seawater from aquarium B

Swab