Fig. 2

Changes in the gut microbiota in SARS-CoV-2-infected PLWH after COVID-19 onset. A, B Taxa bar plot for main class (A) or genus (B) of gut microbiota in participants. C-E)Changes in gut microbiota in SARS-CoV-2 infected PLWH were analyzed using linear discriminant analysis (LDA) effect size in comparison with the SARS-CoV-2 uninfected PLWH. < d8: within 7 days of COVID-19 onset (n = 10) (C), d8-14: 8 − 14 days after COVID-19 onset (n = 9) (D), and > 1 M: over 1 month after COVID-19 onset (n = 7) (E). Red asterisks (*) indicate bacterial genera with statistically significant differences in the multivariate analysis with linear models (MaAsLin)2 analysis adjusted for body mass index (BMI). All analysis was calculated with LDA > 3, p: phylum, c: class, o: order, f: family, g: genus