Genome-wide transcriptional response to silver stress in extremely halophilic archaeon Haloferax alexandrinus DSM 27206 T

Table 7 Transcription rates of genes involved in cell signaling^a

Hfx. alexandrinus DSM 27206 ORF^b	Gene name	Log₂FC			Annotation
Hfx. alexandrinus DSM 27206 ORF^b	Gene name	0.1 mM	0.25 mM	0.5 mM	Annotation
Hfx-2019-SC1-cds229		-2.04	-	-	Twin-arginine translocation pathway signal sequence-containing protein
Hfx-2019-SC2-cds559		-2.16	-	-	TatA Sec-independent protein secretion pathway component
Hfx-2019-SC2-cds1096		-	-	-2.15	Response regulator, His Kinase A (phospho-acceptor) domain
Hfx-2019-SC5-cds196		-	-2.41	-	Protein containing a halocin C8-like bacteriocin domain

^aRNA-Seq was used to determine the expression levels of the genes in Hfx. alexandrinus DSM 27206, as detailed in the section on Materials and Methods. The data are the average of three replicates. The threshold of differential expression genes was: |log₂(FoldChange)|> 1 and qvalue < 0.00. Dashes indicate that there were minimal changes to the transcription, not considered statistically significant. ^bThe gene name, number, and annotation were generated through the gDNA sequencing of the tested strain, as described in the Materials and Methods section

ISSN: 1471-2180