Genome-wide transcriptional response to silver stress in extremely halophilic archaeon Haloferax alexandrinus DSM 27206 T

Table 5 Transcription rates of DNA- binding proteins^a

Hfx. alexandrinus DSM 27206 ORF^b	Gene name	Log₂FC			Annotation
Hfx. alexandrinus DSM 27206 ORF^b	Gene name	0.1 mM	0.25 mM	0.5 mM	Annotation
Hfx-2019-SC1-cds429		2.41	-	-	Helix-turn-helix domain-containing proteins
Hfx-2019-SC1-cds430		3.14	-	-	Helix-turn-helix domain-containing proteins
Hfx-2019-SC3-cds305		-	-	2.09	Helix-turn-helix domain-containing proteins
Hfx-2019-SC6-cds1	MC1	-	-	2.02	Non-histone chromosomal protein
Hfx-2019-SC1-cds537	xerD	-	-2.49	-2.11	Integrase/recombinase
Hfx-2019-SC1-cds560	sbc	-	-3.3	-	Exonuclease
Hfx-2019-SC1-cds580		-	-	-2.01	Orc1-type DNA replication protein
Hfx-2019-SC2-cds231		-	-	-2.27	HNH endonuclease
Hfx-2019-SC7-cds13		-	-4.04	-4.62	DNA-binding protein
Hfx-2019-SC7-cds14		-	-3.56	-3.95	HNH endonuclease
Hfx-2019-SC7-cds48		-	-2.63	-3.21	DNA-binding protein

^aRNA-Seq was used to determine the expression levels of the genes in Hfx. alexandrinus DSM 27206, as detailed in the section on Materials and Methods. The data are the average of three replicates. The threshold of differential expression genes was: |log₂(FoldChange)|> 1 and qvalue < 0.00. Dashes indicate that there were minimal changes to the transcription, not considered statistically significant. ^bThe gene name, number, and annotation were generated through the gDNA sequencing of the tested strain, as described in the Materials and Methods section.

ISSN: 1471-2180