Table 7 List of Arcobacter genus and species-species oligonucleotide PCR primer sequences used in this study
From: Pathogenicity assessment of Arcobacter butzleri isolated from Canadian agricultural surface water
Arcobacter spp. | Target gene | Sequences (5´-3´) | size (bp) | Reference |
|---|---|---|---|---|
Genus | 16S rRNA | AGA GAT TAG CCT GTA TTG TAT C TAG CAT CCC CGC TTC GAA TGA | 1223 | Harmon and Wesley [63] |
A. butzleri | 16S rRNA | GCA CAT TCT ATT TTC AAA GAA GGG GAA TGG GTT ATT AAA CTC TGC | 654 | Khan et al. [62] |
A. lanthieri | gyrB | CAG CTT TAT GTG AAG TTG TAG C TGC CTT TTT AGC AGC TTC TC | 461 | |
A. faecis | cpn60 | GCT CCA GGA AGT ACA AAA GTA G AGG CTA GCA GCT ACT CCC | 372 | |
A. skirrowii | gyrA | GGC GAT TTA CTG GAA CAC A CGT ATT CAC CGT AGC ATA GC | 262 | |
A. cryaerophilus | rpoB | AGT TCT GAA GCA ATA GAT TTA ATG G CTG CAA TTC CTT CGA TTT GC | 152 | |
A. cibarius | gyrA | GCA CAA TCT AGG GGA ACT T CAA ATC AAG GGC TTC AGC AC | 72 |