Table 5 Farm-specific prevalence and genetic characterizations of G. duodenalis and Cryptosporidium spp. in diarrheic pigs in Chongqing and Sichuan Provinces, China
Provinces | Farms | â„– tested | G. duodenalis | Cryptosporidium spp. | ||||
|---|---|---|---|---|---|---|---|---|
Overall infection | Mono infection | Mixed infection of Eb & G. duodenalis | ||||||
No. (%) | Assemblage (No.) | No. (%) | No. (%) | Genotype (No.) | No. (%) | |||
Sichuan | 1 | 23 | 1(4.4%) | A (1) | 0 | 1 | PigCE07.02 + A (1) | 0 |
2 | 48 | 7 (14.6%) | A (7) | 0 | 7 | PigCE01.01 + A (2), PigCE01.02 + A (1), PigCE01.03 + A (1), PigCE08.02 + A (1), PigCE07.05 + A (1), B + A (1) | 0 | |
5 | 0 | 0 | 0 | 0 | 0 | 0 | ||
3 | 50 | 5 (10.0%) | A (5) | 0 | 5 | PigCE06.01 + A (1), PigCE08.02 + A (1), PigCE08.09 + A (1), PigCE08.10 + A (1), PigCE08.12 + A (1), | 0 | |
4 | 50 | 0 | 0 | 0 | 0 | 0 | 0 | |
5 | 23 | 4 (17.4%) | A (4) | 0 | 4 | PigCE01.02 + A (1), PigCE08.07 + A (1), PigCE08.16 + A (1), B + A (1) | 0 | |
6 | 30 | 0 | 0 | 0 | 0 | 0 | 0 | |
20 | 2 (10.0%) | A (1) | 1 | 1 | B + A (1) | 0 | ||
7 | 40 | 2 (5.0%) | A (2) | 1 | 1 | B + A (1) | 0 | |
11 | 0 | Â | 0 | 0 | 0 | 0 | ||
8 | 45 | 2 (4.4%) | A (2) | 0 | 2 | PigCE08.02 + A (1), PigCE08.07 + A (1) | 0 | |
5 | 0 | 0 | 0 | 0 | 0 | 0 | ||
9 | 50 | 18 (36.0%) | A (18) | 6 | 12 | PigCE02.01 + A (1), PigCE07.01 + A (1), PigCE08.02 + A (6), PigCE08.07 + A (2), PigCE08.10 + A (1), B + A (1), | 0 | |
Subtotal | 400 | 41 (10.3%) | A (41) | 8 (2) | 33 (8.3) | B + A (4), PigCE01.01 + A (2), PigCE01.02 + A (2), PigCE01.03 + A (1), PigCE02.01 + A (1), PigCE06.01 + A (1), PigCE07.01 + A (1), PigCE07.02 + A (1), PigCE07.05 + A (1), PigCE08.02 + A (9), PigCE08.07 + A (4), PigCE08.09 + A (1), PigCE08.10 + A (2), PigCE08.12 + A (1), PigCE08.16 + A (1) | 0 | |
Chongqing | 10 | 20 | 3 (15.0%) | A (3) | 1 | 2 | PigCE07.04 + A (1), PigCE08.03 + A (1) | 0 |
14 | 0 | 0 | 0 | 0 | 0 | 0 | ||
11 | 20 | 2 (10.0%) | A (2) | 0 | 1 | B + A (1), III + A (1) | 0 | |
12 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | |
6 | 0 | 0 | 0 | 0 | 0 | 0 | ||
1 | 0 | 0 | 0 | 0 | 0 | 0 | ||
13 | 25 | 0 | 0 | 0 | 0 | 0 | 0 | |
8 | 0 | 0 | 0 | 0 | 0 | 0 | ||
6 | 0 | 0 | 0 | 0 | 0 | 0 | ||
14 | 5 | 0 | 0 | 0 | 0 | Â | 0 | |
|  | Subtotal | 114 | 5 (4.4%) | A (5) | 2 | 3 | B + A (1), PigCE07.04 + A (1), PigCE08.03 + A (1), | 0 |
|  | Total | 514 | 46 (8.95%) | A (46) | 9 (1.75) | 37 (7.2) | B + A (5), PigCE01.01 + A (2) PigCE01.02 + A (2), PigCE01.03 + A (1), PigCE02.01 + A (1), PigCE06.01 + A (1), PigCE07.01 + A (1), PigCE07.02 + A (1), PigCE07.04 + A (1), PigCE07.05 + A (1), PigCE08.02 + A (9), PigCE08.03 + A (1), PigCE08.07 + A (4), PigCE08.09 + A (1), PigCE08.10 + A (2), PigCE08.12 + A (1), PigCE08.16 + A (1), III + A (1) | 0 |