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Table 5 Multidrug resistance patterns, virulence genes, and drug resistance-associated genes of MDR S. typhimurium and E. coli isolates

From: Antimicrobial resistance profiles of salmonella spp. and escherichia coli isolated from fresh nile tilapia (oreochromis niloticus) fish marketed for human consumption

Pathogens

Antibiotic resistant pattern

No. of antibiotics (Classes*)

Virulence genes

Antibiotic resistant associated genes

   

invA

hilA

uidA

tetA

tetC

blaTEM-1

blaCMY-2

blaCTX-M

blaZ

sul2

catI

dfrA7

strA

aadA

S. typhymurium WES-09

CPD, RIF, S, VA

4 (4)

+

+

NT

 

+

+

+

+

+

+

 

+

+

+

S. typhymurium MAK-22

AX, NIT, P-G, RIF, VA

5 (5)

+

+

NT

+

+

+

+

+

+

+

 

+

+

+

S. typhymurium EMB-32

AX, CAZ, C, MRP, VA

5 (5)

+

+

NT

+

+

+

+

+

+

+

+

 

+

+

E. coli MAK-26

AX, MRP, RIF, VA

4 (4)

NT

NT

+

+

+

+

+

+

+

+

 

+

+

+

E. coli LAN-35

AX, MRP, RIF, VA

4 (4)

NT

NT

+

 

+

+

+

+

+

+

 

+

+

+

  1. AX = Ampicillin/Cloxacillin; CPM = Cefepime; CPD = Cefpodoxime; CAZ = Ceftazidime; C = Chloramphenicol; MRP = Meropenem; NIT = Nitrofurantoin; P = Penicillin-G; RIF = Rifampicin; S = Streptomycin; VA = Vancomycin. NT = Not Tested
  2. TetA and tetC = Tetracycline resistant genes, blaTEM-1, blaCMY-2, blaCTX-M, blaZ = Beta lactamases-encoding genes, catI = chloramphenicol resistant gene, sul2 = sulphonamide resistant gene, dfrA7 = Trimethoprim resistant gene, strA = streptomycin inactivating gene and aadA = Aminoglycoside resistant genes
  3. + indicates the presence of the resistance genes following amplification by PCR; − indicates the absence of the target resistance genes following amplification by PCR
  4. *Classes of antibiotics are: Carbapenems (MRP), Cephalosporin (third generation; CAZ), Penicillin (P-G), Beta-lactam (AX), Cephalosporin (third generation; CPD), Phenicol (C), Cephalosporin (fourth generation, CPM), Nitrofurans (NIT), Glycopeptides (VA), Ansamycin (RIF), and Aminoglycosides (S)