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Fig. 3 | BMC Microbiology

Fig. 3

From: Holo-omics analysis reveals the influence of gut microbiota on obesity indicators in Jinhua pigs

Fig. 3

|Results of DEGs of low-fatness and high-fatness -in jejunal and colonic tissues. A, C The two groups of differentially expressed gene profiles including the number of upregulated and downregulated genes in the jejunum and colon regions are shown by volcano plots. Down-regulated: p < 0.05 & log2foldchange < -1; Up-regulated: p < 0.05 & log2foldchange > 1. B, KEGG pathway enrichment analysis of differentially expressed genes between the two groups. y-axis shows the name of the pathway and x-axis shows the enrichment factor. Pathways with significant enrichment are shown in the KEGG scatter plot. The enrichment factor is the ratio of the number of differentially expressed genes to the number of all genes annotated in a particular pathway. The q-value, obtained through the Benjamini-Hochberg (BH) method, is a corrected value for the p-value. A q-value less than 0.05 is considered statistically significant, indicating significant findings after controlling for multiple testing

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