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Table 6 Nif – and Nif + genes of R. cellulosilyticum strain R3

From: Genomic insights into plant growth promoting rhizobia capable of enhancing soybean germination under drought stress

Genome ID

Accession

Annotation

Feature Type

Start

End

Length

Strand

FIGfam ID

PATRIC genus-specific families (PLfams

PATRIC cross-genus families (PGfams)

AA Length

Gene Symbol

Product

379,345

379.345.con.0001

PATRIC

CDS

5136

5657

522

–

FIG00017434

  

173

nifE

[NiFe] hydrogenase HoxFUYH(E) maturation factor HoxW

379,345

379.345.con.0001

PATRIC

CDS

3068

3526

459

+

FIG00004977

 

PGF_00025668

152

nifX

NifX-associated protein

379,345

379.345.con.0001

PATRIC

CDS

649

1251

603

–

 

PLF_44937_00001956

PGF_03973235

200

nifA

Nitrogenase (molybdenum-iron)-specific transcriptional regulator NifA

379,345

379.345.con.0002

PATRIC

CDS

37348

38454

1107

–

   

368

nifA

Nitrogenase (molybdenum-iron)-specific transcriptional regulator NifA

379,345

379.345.con.0003

PATRIC

CDS

4051

4725

675

+

FIG00021623

 

PGF_00025976

224

nifQ

Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ

379,345

379.345.con.0003

PATRIC

CDS

42478

43125

648

+

 

PLF_222_00002287

PGF_00052664

215

nifQ

Similar to nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ

379,345

379.345.con.0003

PATRIC

CDS

84935

85576

642

–

FIG00021623

PLF_222_00002287

PGF_00052664

213

nifQ

Similar to nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ

379,345

379.345.con.0003

PATRIC

CDS

40839

41456

618

+

FIG00021623

PLF_222_00002287

PGF_00052664

205

nifQ

Similar to nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ

379,345

379.345.con.0003

PATRIC

CDS

102443

103093

651

+

FIG00021623

PLF_222_00002287

PGF_00052664

216

nifQ

Similar to nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ