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Table 1 Spoligotyping versus Ag85C (G-A) SNP for LAM detection

From: Exploring the “Latin American Mediterranean” family and the RDRio lineage in Mycobacterium tuberculosis isolates from Paraguay, Argentina and Venezuela

 

Spoligotyping

 

aAG85C

LAM

Not LAM

New, orphan, unknown

PARAGUAY

SNP

105

9

19

No SNP

4

97

14

Mixed

2

7

1

ARGENTINA

SNP

22

13

1

No SNP

0

18

0

Mixed

0

1

0

VENEZUELA

SNP

63

0

7

No SNP

0

23

4

Mixed

0

2

1

  1. aNumber of isolates with presence or absence of the Ag85C103 SNP. Mixed = two amplification products indicating presence and absence of the SNP. In this table strains that lacked result for spoligotyping or the SNP were excluded