Skip to main content

Table 1 Bacterial strains and plasmids used in this study

From: OxyR-regulated catalase CatB promotes the virulence in rice via detoxifying hydrogen peroxide in Xanthomonas oryzae pv. oryzae

Strain or plasmid

Relevant characteristicsa

Source or Reference

Escherichia coli

 DH5α

supE44 ΔlacU169(Φ80lacZΔM15) hsdR17 recA1 endA1 gyrA96 thi-1 relA1

Hanahan 1983 [47]

 BL21

For protein expression

Novagen

Xanthomonas oryzae pv. oryzae

 PXO99A

Wildtype strain, Philippine race 6

Lab collection

 ∆catB

catB gene deletion mutant derived from PXO99A, Gmr

This study

 ∆catB(pBBR-catB)

Complementary bacterium strain of ∆catB, Apr

This study

 ∆oxyR

oxyR gene deletion mutant derived from PXO99A, Gmr

Our lab

 ∆oxyR(pBBR-oxyR)

Complementary bacterium strain of ∆oxyR, Apr

Our lab

Plasmid

 pMD18-T

Cloning vector, Apr

TaKaRa, Tokyo

 pET-28a

Expression vector to generate a N-terminal His6 tag, Kmr

Haigene

 pK18mobsacB

Suicidal vector carrying sacB gene for mutagenesis, Gmr

Schafer et al., 1994 [44]

 pBBR1MCS-4

Broad-host range expression vector, Apr

Kovach et al., 1995 [48]

 pHM1

Broad-host range expression vector, Spr

Hopkins et al., 1992 [49]

 pHT304BZ

Promoterless lacZ vector, Apr

Lereclus et al., 1996 [50]

 pMDcatB

pMD18-T derivative carrying the full length of catB, Apr

This study

 pMDcatBr

pMD18-T derivative carrying the right fragment of catB, Apr

This study

 pMDcatBl

pMD18-T derivative carrying the left fragment of catB, Apr

This study

 pMDoxyR

pMD18-T derivative carrying the full length of oxyR, Apr

This study

 pKcatB

pK18mobsacB derivative carrying the full length of catB, Gmr

This study

 pEToxyR

pET-28a derivative carrying the full length of oxyR, Kmr

This study

 pBBR-catB

pBBR1MCS-4 derivative carrying the full length of catB, Apr

This study

 pHTpB

pHT304BZ derivative carrying the promoter region of catB, Apr

This study

 pH-lacZ

pHM1 derivative carrying the promoterless lacZ, Spr

This study

 pH-catBp-lacZ

pHM1 derivative carrying the promoter region of catB and promoterless lacZ, Spr

This study

  1. aApr,Kmr,Spr,and Gm rindicate resistant to ampicillin, kanamycin, spectinomycin and gentamicin, respectively