Table 3 Ontological categories associated with groups of genes identified by K means analysis of the time course array data
From: A Candida albicans early stage biofilm detachment event in rich medium
Process GO term | Enrichment1 | P value |
|---|---|---|
Group 1 (17/37)2 | Â | Â |
Chromatin assembly/disassembly | 18.07 | 7.41e-5 |
DNA packaging | 10.13 | 0.00011 |
DNA metabolic process | 4.69 | 0.00114 |
Regulation of meiosis | 39.0 | 0.00155 |
Group 2 (12/17) | Â | Â |
Response to stimulus | 4.85 | 0.00063 |
Regulation of biological quality | 8.76 | 0.00087 |
Pseudohyphal growth | 20.75 | 0.00487 |
Response to stress | 4.82 | 0.00727 |
Cell growth | 15.09 | 0.00783 |
Group 3 (13/22) | Â | Â |
Carbohydrate biosynthetic process | 12.75 | 0.01118 |
Glycoprotein biosynthetic process | 9.00 | 0.02203 |
Glycoprotein metabolic process | 8.50 | 0.02260 |
Response to simulus | 2.98 | 0.03761 |
Response to stress | 3.33 | 0.05641 |
Cellular carbohydrate metabolic process | 4.25 | 0.08011 |
Group 4 (12/20) | Â | Â |
Heme metabolic process | 55.33 | 0.00066 |
Heme biosynthetic process | 55.33 | 0.00066 |
Tetrapyrrole biosynthetic process | 55.33 | 0.00087 |
Porphyrin biosynthetic process | 41.50 | 0.00087 |
Porphyrin metabolic process | 41.50 | 0.00112 |
Tetrapyrrole metabolic process | 41.50 | 0.00112 |
Group 5 (10/24) | Â | Â |
Energy derivation/oxidation of organic compounds | 11.1111 | 0.00216 |
Generation of precursor metabolites | 8.5714 | 0.00459 |
Aspartate family amino acid metabolism | 18.1818 | 0.00519 |
Sulfur metabolic process | 16.6667 | 0.00661 |
Alcohol metabolic process | 6.8966 | 0.03450 |
Metabolic process | 1.4706 | 0.05460 |
Group 6 (9/18) | Â | Â |
Aerobic respiration | 19.5882 | 0.00041 |
Cellular respiration | 19.5882 | 0.00043 |
Energy derivation/oxidation of organics | 12.3333 | 0.001'54 |
Generation of precursor metabolites | 6.3429 | 0.00330 |
Pathogenesis | 6.3429 | 0.03922 |
Interspecies interaction | 4.9333 | 0.06136 |
Group 7 (12/18) | Â | Â |
Interaction with host | 17.5263 | 5.91e-5 |
Adhesion during symbiosis | 31.2500 | 0.00014 |
Adhesion to host | 31.2500 | 0.00014 |
Biological adhesion | 20.8333 | 0.00039 |
Pathogenesis | 9.5143 | 0.00065 |
Single species biofilm formation/biomaterial | 41.5000 | 0.00139 |