Table 2 Detection of fungal taxa from root tips of spruce and beech using different identification approaches.
Species name | Morphotyping/ITS sequencing of individual ECM tips | ITS cloning/sequencing of ECM tip pools | Phylochip |
|---|---|---|---|
samples from Picea abies | |||
Thelephora terrestris | x | x | x |
Cenococcum geophilum | x | x | x |
Clavulina cristata | x | x | x |
Atheliaceae (Piloderma) sp | x | x | no oligonucleotide |
Cortinarius sp 1 | x | x | x |
Xerocomus pruinatus | x | x | x |
Tomentellopsis submollis | morphotyping only | x | x |
Inocybe sp | morphotyping only | x | x |
Xerocomus badius | x | x | x |
Tylospora asterophora | x | x | x |
Tylospora fibrillosa | x | x | x |
Sebacina sp | x | no oligonucleotide | |
Cortinarius sp 2 | x | ||
Russula integra | x | ||
Cortinarius alboviolaceus | x | ||
Cortinarius traganus | x | ||
Amanita muscaria | x | ||
Lactarius sp1 | morphotyping only | ||
ECM from Fagus sylvatica | |||
Pezizales sp | x | x | no oligonucleotide |
Sebacinaceae sp | x | x | no oligonucleotide |
Laccaria amethystina | x | x | x |
Endophyte sp. | x | no oligonucleotide | |
Inocybe napipes | x | x | x |
Xerocomus pruinatus | x | x | x |
Cortinarius sp 2 | x | x | x |
Cortinarius sp 3 | x | x | x |
Cortinarius tortuosus | x | x | |
Russula puellaris | x | x | x |
Tomentellopsis submollis | x | x | x |
Laccaria laccata | x | x | x |
Cenococcum geophilum | x | x | |
Cortinarius sp 1 | x | ||
Cortinarius hinnuleus | x | ||
Russula integra | x | ||
Laccaria bicolor | x | ||
Amanita rubescens | morphotyping only | ||
Lactarius sp2 | morphotyping only | ||
Tomentella sp | morphotyping only |