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Table 6 Oligonucleotides used for gene sequencing

From: Melanin is an essential component for the integrity of the cell wall of Aspergillus fumigatus conidia

Gene name (gene product)

Genbank accesion no.

Primer

Nucleotide sequence (5'-3')

Nucleotide

coordinates1

AfALB1 (polyketide synthase)

AF025541

ALB1-F

CAAACCACTCGCCATGGA

585-602

  

ALB1-2R

TCGGAGCAGAAGCTGAGGATA

1459-1479

  

ALB1-3F

AAACACTTCAAGGCTCCTGGA

1385-1405

  

ALB1-4R

TTGATACGACCAGGCGTGAAT

2263-2283

  

ALB1-5F

CGACGACTACCGTGAGATCAA

2194-2214

  

ALB1-6R

CGCAGCAGAGAAGTTGTTGAT

3059-3079

  

ALB1-7F

CGCAATGCTCATATTGCCT

2990-3008

  

ALB1-8R

TGGATCGAGCAGATGTTGAA

3843-3863

  

ALB1-9F

ACGCAGCAGTGTCAGATGG

3782-3800

  

ALB1-10R

AAGAGCCACTCCATTGACCTT

4670-4690

  

ALB1-11F

ACGGAAACACGGCGACATT

4596-4614

  

ALB1-12R

CGATAATGTCATCCCCTTCA

5471-5490

  

ALB1-13F

GCGACGCTACATACCAGACAT

5395-5415

  

ALB1-14R

AGATCCATGCCAAGTGTCTCT

6267-6287

  

ALB1-15F

ATTGACCCGAGCGACAACTT

6193-6212

  

ALB1-16R

TTAGCCCATTTGCTGTCGTT

6958-6977

  

ALB1-17F

ACTTCCTCGCCTTCATCGACT

6902-6922

  

ALB1-R

TTCACCCCACTAGGAACTCAT

7249-7269

AfAYG1 (polyketide shortening)

AF116902

AYG1-F

ATGCCACGCTGGATCCTT

333-350

  

AYG1-2R

ATGATCAGCACGATGGGGA

959-977

  

AYG1-3F

CCCACATCCCCATTTACATC

905-924

  

AYG1-R

TCAGTTCTTCGTCTTCGAAGG

1732-1752

AfARP1 (scytalone dehydratase)

AFU95042

ARP1-F

TCACACCACAATGGTCGAAA

321-340

  

ARP1-R

CACATGAAATGGTACTTTTGC

955-975

AfARP2 (hydroxynaphtalene reductase)

AF099736

ARP2-F

ATGGTGAACACCTGCACCTAT

331-351

  

ARP2-R

TCAGCATTCCAAATCCCCA

1134-1152

AfABR1 (vermelone dehydratase)

AF0116901

ABR1-F

ATGTTCCATTCCAGGGCTCT

248-267

  

ABR1-1R

TCGTCGTCGTAGGCAAATG

730-748

  

ABR1-2F

TGGTATCACTCGCACGAAAT

654-673

  

ABR1-3R

TTGATGATGATCTCCACGACC

1520-1540

  

ABR1-4F

AACGCTTCTAATGCGTCGAT

1461-1480

  

ABR1-R

CTACGAGGCATTTGCGCAG

2323-2341

AfABR2 (oxydase)

AF104823

ABR2-F

ATACACGACAACAGGATGTGG

490-510

  

ABR2-2R

TCAATTCCTCGGGGTCGT

1371-1388

  

ABR2-3F

TTCCCACCAGATACAAGCTGA

1284-1304

  

ABR2-4R

TTGCGGGTCGTGATCTTGA

2168-2286

  

ABR2-5F

TAGCAACCTTGCTGCGTTG

2103-2121

  

ABR2-R

GGGCAATCACATAGGAGTGA

2552-2571

  1. 1 Nucleotide coordinates refer to the corresponding gene sequence in the Genbank database.