Table 1 S. pneumoniae strains origin and characteristics
From: Evaluation and selection of tandem repeat loci for Streptococcus pneumoniae MLVA strain typing
Strain id | Reference | Origin | Serotype | Year | Sitea | Country | Peni Gb | Ery |
|---|---|---|---|---|---|---|---|---|
RP01 | 100277 | AMP (IPP) | 12A | 2004 | CSF | Burkina Faso | S | S |
RP02 | 200801 | AMP (IPP) | 1 | 2004 | CSF | Burkina Faso | S | S |
RP03 | 300141 | AMP (IPP) | 12B | 2004 | CSF | Burkina Faso | S | S |
RP04 | 400202 | AMP (IPP) | RSGa | 2004 | CSF | Burkina Faso | S | S |
RP05 | 500205 | AMP (IPP) | RSG | 2004 | CSF | Burkina Faso | S | S |
RP06 | 600003 | AMP (IPP) | 5 | 2004 | CSF | Burkina Faso | S | S |
RP07 | 700025 | AMP (IPP) | 1 | 2004 | CSF | Burkina Faso | S | S |
RP08 | 800830 | AMP (IPP) | 6A | 2004 | CSF | Burkina Faso | S | S |
RP09 | 900518 | AMP (IPP) | 6A | 2004 | CSF | Burkina Faso | S | S |
RP10 | 1000244 | AMP (IPP) | 6A | 2004 | CSF | Burkina Faso | S | S |
RP11 | 1100236 | AMP (IPP) | 1 | 2004 | CSF | Burkina Faso | S | S |
RP12 | 1200327 | AMP (IPP) | 5 | 2004 | CSF | Burkina Faso | S | S |
RP13 | 1300373 | AMP (IPP) | 5 | 2004 | CSF | Burkina Faso | S | S |
RP14 | 20020876 | CHPA | 14 | 2002 | Blood | France (sud-est) | R | R |
RP15 | 20020953 | CHPA | 14 | 2002 | Blood | France (sud-est) | I | S |
RP16 | 20020978 | CHPA | 18C | 2002 | Blood | France (sud-est) | S | S |
RP17 | 20021029 | CHPA | 14 | 2002 | Blood | France (sud-est) | R | R |
RP18 | 20021131 | CHPA | 23 | 2002 | Blood | France (sud-est) | I | R |
RP19 | 20022003 | CHPA | 3 | 2002 | Blood | France (south-east) | S | S |
RP20 | 20022042 | CHPA | 3 | 2002 | Blood | France (south-east) | S | S |
RP21 | 20022215 | CHPA | 19A | 2002 | Blood | France (south-east) | I | R |
RP22 | 20022337 | CHPA | 10A | 2002 | Blood | France (south-east) | S | S |
RP23 | 20022338 | CHPA | 23A | 2002 | Blood | France (south-east) | I | S |
RP24 | 20022339 | CHPA | 23A | 2002 | Blood | France (south-east) | S | S |
RP25 | 4030143494 | HIA Percy | 3 | 2004 | Pulmonary | France (Paris area) | S | S |
RP26 | 488015780 | HIA Percy | RSGc | 2004 | Pulmonary | France (Paris area) | S | S |
RP27 | 488019294 | HIA Percy | NTd | 2004 | Pulmonary | France (Paris area) | I | R |
RP28 | 4040145233 | HIA Percy | 9V | 2004 | Pulmonary | France (Paris area) | I | R |
RP29 | 4050149284 | HIA Percy | 9V | 2004 | Pulmonary | France (Paris area) | R | R |
RP30 | 4060150356 | HIA Percy | RSG | 2004 | Pulmonary | France (Paris area) | S | S |
RP31 | 4060150868 | HIA Percy | 9V | 2004 | Pulmonary | France (Paris area) | I | R |
RP32 | 4060151258 | HIA Percy | 23 | 2004 | Pulmonary | France (Paris area) | I | R |
RP33 | 488034644 | HIA Percy | 6A | 2004 | Pulmonary | France (Paris area) | S | S |
RP34 | 488037640 | HIA Percy | 19A | 2004 | Pulmonary | France (Paris area) | I | S |
RP35 | 4070153283 | HIA Percy | 11A | 2004 | Blood | France (Paris area) | S | S |
RP46 | PED012 | AMP (IPP) | 1 | 2002 | CSF | Burkina Faso | I | S |
RP47 | MED042 | AMP (IPP) | 1 | 2002 | CSF | Burkina Faso | I | S |
RP48 | PED081 | AMP (IPP) | 1 | 2003 | CSF | Burkina Faso | S | UNe |
RP49 | MED142 | AMP (IPP) | 1 | 2003 | CSF | Burkina Faso | S | S |
RP50 | PED159 | AMP (IPP) | 1 | 2003 | CSF | Burkina Faso | S | S |
RP51 | Q06003 | AMP (IPP) | 25 | 2003 | CSF | Burkina Faso | S | S |
RP52 | MED126 | AMP (IPP) | 1 | 2003 | CSF | Burkina Faso | S | S |
RP53 | Q14004 | AMP (IPP) | 1 | 2003 | CSF | Burkina Faso | S | S |
RP54 | PED124 | AMP (IPP) | 1 | 2003 | CSF | Burkina Faso | S | S |
RP55 | H01368 | AMP (IPP) | 1 | 2003 | CSF | Burkina Faso | S | S |