Gene | Primer sequencesa | Relative position in Rd | Use |
---|---|---|---|
licA | Fb: GTAGGATTTGTTAAAACTTGCTACAAGCC | 1608693 | probe |
 | R: GGCAATTCCTCTAACAGTTTAAATGCTGCG | 1609579 |  |
licA | 5'F1: GAATAAATTCATAAGAYTCAGAGCCTTAC | 1608523 | lic1 locus |
 | 5'F2: CAGCTAACCGAGCTTGGGTGAGAAAGTGG | 1608476 | and |
 | mid R: GGCGAAACTCATCGAATACGC | 1609107 | 5'-CAAT- |
 | 3'R: GCCCAAAATACAGCGGACAG | 1609626 | 3' |
licB | F: ATGCGTGGCTATCTCTTTGGCATAC | 1609583 | probe |
 | R: TCATTTTTGTTCCCCTTTGTAATAAAGTG | 1610461 |  |
licB | 5'F: GTTATTTGATATAGCGACGATCATTGAGG | 1609316 | lic1 locus |
 | mid F: CGGATTCGCCTTGGCTATTATTTCTTCTTCG | 1609957 |  |
 | mid R: GAGGATATCACTATTTCAGATGACCACCC | 1610091 |  |
 | 3'R: GTGTAAATACCCTGTAACAATGACAATATTATCG | 1610628 |  |
licC | F: ATGAATGCAATCATTTTAGCAGCAGG | 1610458 | probe |
 | R: ATGTGGTGATAGTCATCAAGGTTATCC | 1611125 |  |
licC | mid F: CGTATTGATATTGGTTCACTGAATCAACCC | 1610884 | lic1 locus |
licD | F: ATGAAAAAATTGACTCTCAGAG | 1611159 | probe |
 | R: TTACAAAATATACGCTTCTTGAATATG | 1611956 |  |
licD | 5'F: AATTGGGATACCATTCCGATGG | 1611016 | lic1 locus |
 | 3'R: AAGGGGCGCAAGAGCAGTTAG | 1612129 | and licD alleles |