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Table 2 Bacterial strains and plasmids used in this work

From: The T box regulatory element controlling expression of the class I lysyl-tRNA synthetase of Bacillus cereus strain 14579 is functional and can be partially induced by reduced charging of asparaginyl-tRNAAsn

Strains, plasmids

Relevant characteristics

Reference or source

Strains

  

E. coli

  

TG-1

supE hsd Δ5 thi Δ(lac-proAB) F'[traD 36]

[24]

TP611

recBC hsdR - M - cyab10pcn

[25]

B. cereus 14579

wild type isolate

[34]

B. subtilis

  

168

trpC2

Laboratory stock

1A717

amyE::erm EmR

[32]

1A765

trpC2 lys

[35]

NF33

trpC2 lys amyE::pBCJ307 (PlysK (T box)lacZ) CmR

This study

NF52

trpC2 amyE::pNF48 (PlysK (T box)lysK) SpecR

This study

NF54

trpC2 amyE::pNF48 (PlysK (T box)lysK) SpecR DlysS KanR

This study

NF58

trpC2 amyE::pBCJ307 (PlysK (T box)lacZ) CmR asnS::pNF40 (Pspac asnS) EmR

This study

NF60

trpC2 amyE::pBCJ307 (PlysK (T box)lacZ) CmR asnS::pNF40 (Pspac asnS) EmRpMap65 (P pe -lacI) PhR

This study

NF113

trpC2 lysS::pNF112 (PlysK (T box)lysS) CmR

This study

NF204

trpC2 amyE:: pBCJ307 (PlysK (T box)lacZ) EmR CmR

This study

NF205

trpC2 lysS::pNF112 (PlysK (T box)lysS) CmR amyE:: pBCJ307(PlysK (T box)lacZ) EmR

This study

NF206

trpC2 amyE::pNF48 (PlysK (T box)lysK) SpecR DlysS: KanR amyE::pBCJ307(PlysK (T box)lacZ)CmR

This study

BCJ363

trpC2 amyE::pBCJ307 (PlysK (T box)lacZ) CmR

This study

BCJ366

trpC2 amyE::pBCJ307 (PlysK (T box)lacZ) CmR lys::pXZ2 (Pspac lysS) EmR

This study

BCJ367

trpC2 amyE::pBCJ307 (PlysK (T box)lacZ) CmR lys::pXZ2 (Pspac-lysS) EmR pMap65 PhlR

This study

Plasmids

  

pBluescript2 KS(-)

cloning vector ApR

Stratagene, La Jolla CA

pMutin4

integration vector for B. subtilis

[27]

pBCJ102

pBluescript based vector containing transcription terminator cassettes ApR

[29]

pBCJ144

vector to replace part of B. subtilis lysS with KanR

[29]

pBCJ307

vector with transcriptional fusion of B. cereus lysK promoter and T box with lacZ CmR

This study

pDG268

vector to generate lacZ promoter fusions at the amyE locus by double crossover ApR CmR

[26]

pDG1730

vector for integration at the amyE locus in B. subtilis SpecR

[30]

pXZ2

Vector to placing B. subtilis lysS under control of IPTG inducible Pspac promoter EmR

This study

pMUTIN-XZ

pMUTIN4 with the lacZ gene removed EmR

This study

pMap65

replicating B. subtilis plasmid encoding penP-lacI PhlR KanR

[28]

pNF30

plasmid with B. cereus lysK promoter and T box element in pBCJ102 ApR

This study

pNF40

B. subtilis asnS promoter on 516 bp fragment in pMUTIN-XZ

This study

pNF48

B. cereus lysK promoter and lysK gene cloned into pDG1730

This study

pNF112

the lysK promoter and T box element (423 bp) fused to B. subtilis lysS (672 bp fragment)

This study