Marker name | Relative position | Forward 5′ → 3′ | Reverse 5′ → 3′ | Amplicon size range (bp) | Amplicons/sample (mean ± SE) | Number of amplicons | Fingerprint reference to raw data |
---|---|---|---|---|---|---|---|
AFLC01 | 190–340 | CCGACCTCACGACGCATTAT | CCGGCTAGCTTCAACAGACG | 127–370 | 0.80 ± 0.36 | 6 | AFLC01 |
AFLC02 | 1367–1521 | GGTTGGCGGATTGAGAGGTA | GGAGATCAGCCGAGAAGACA | 161–216 | 1.00 ± 0.00 | 6 | AFLC02 – AFLC14 |
AFLC03 | 5738–5868 | TCCGCCGAGAGCCATAATAG | GGATGCTGACACCTCGATAG | 152–155 | 1.00 ± 0.00 | 3 | AFLC15 |
AFLC04 | 7897–8073 | ACAGCTGGCATGCTCCGTAT | ATTGCTGCGCACGACGCTTA | 194–199 | 1.00 ± 0.00 | 4 | AFLC16 |
AFLC05 | 11633–11783 | GTGGATGGACTGCCACTTAG | AGACCACAGTGAGTGCTTCT | 161–195 | 1.00 ± 0.00 | 9 | AFLC17 |
AFLC06 | 12333–12543 | GCTGTCCTGGACGGATAGTA | CATCGGTCAACGACGAAGTA | 230–232 | 1.00 ± 0.00 | 3 | AFLC18 |
AFLC07 | 12715–12889 | GTCAGCAAGAGGAGCCTTCA | GGTCACGGAGATCCTCCATA | 160–197 | 1.00 ± 0.00 | 3 | AFLC03 |
AFLC08 | 14001–14235 | CGCCAGCACGGAGATCGAAT | CGTCTCCTCAGGCGGTCTAT | 243–257 | 1.00 ± 0.00 | 5 | AFLC20 |
AFLC09 | 16162–16331 | AACACTCCGCTGCTCAACTA | AACGCTCAGGCAACGTCGAA | 131–318 | 1.00 ± 0.00 | 7 | AFLC04 |
AFLC10 | 16315–16498 | GACGTTGCCTGAGCGTTAAT | TGACTGGTCGTCGCCAGAAT | 135–218 | 1.00 ± 0.08 | 9 | AFLC21 |
AFLC11 | 21671–21862 | CTCGACGTAGCGTTGAACAG | AACGCATGGCCAGCTAATCT | 157–228 | 1.00 ± 0.11 | 5 | AFLC22 |
AFLC12 | 21895–22149 | CGCAAGGAGCTCGACCAATA | TTCAGCTCAGCGACGAGAGT | 134–278 | 1.00 ± 0.19 | 6 | AFLC23 |
AFLC13 | 22059–22241 | TCGGTTCAATGCTCGAACAC | TCCAACCTTCGGCCTAGTCT | 183–194 | 1.00 ± 0.08 | 3 | AFLC24 |
AFLC14 | 22155–22242 | GACGCCTCGGCTTGTCAAGA | CTCCAACCTTCGGCCTAGTC | 96–121 | 0.80 ± 0.44 | 3 | AFLC05 |
AFLC18 | 62617–62825 | GGCAGCCAGACCAAGGAATA | CCTTCTCGTAGCCGCTCATC | 230–231 | 1.00 ± 0.00 | 2 | AFLC13 |
AFLC19 | 63261–63509 | ACAGGACCGCACGGATCAAT | AGGAGCGGATGTCGAAGTCT | 260–270 | 1.00 ± 0.00 | 6 | AFLC12 |
AFLC20 | 67451–67735 | GCCTAGCGCTCCATTCTCAG | CCATCGTATCCGGCTCTATC | 262–369 | 1.00 ± 0.11 | 11 | AFLC11 |
AFLC21 | 68690–68852 | TACCTTACTCCGCTAAGCAG | GCGGTCACCTACCAATGAAT | 169–321 | 1.00 ± 0.19 | 9 | AFLC10 |
AFLC22 | 68718–68959 | TTCGCAGGAGTGTAGCCAAG | GTTGGAACACGCTCCATAGG | 259–269 | 1.00 ± 0.11 | 7 | AFLC09 |
AFLC23 | 72035–72162 | GGCGTCAGTGGATTCCGGAT | CGTGGTCCGCAGCAATAGTG | 140–156 | 1.00 ± 0.11 | 3 | AFLC08 |
AFLC24 | 73119–73357 | GAACGAGATAACGGCTGCAT | ATCAATCCACGGACCGTTGT | 260–261 | 1.00 ± 0.19 | 2 | AFLC06 |
AFLC25 | 72652–72811 | CAGTGCGACCGGATGGTACA | CGGCTGAACGCGATGACTCT | 110–184 | 0.80 ± 0.39 | 5 | AFLC07 |
AFLC26a | 13627–13702 | CGGCGTGGTGCGGTACTAAT | TAATACGCGCCGGCATCTCC | 89–95 | 1.00 ± 0.00 | 6 | AFLC19 |