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Table 3 Number of differentially regulated genes located on plasmids and the chromosome (padj. < 0.05) for E. coli O157:H7 Sakai, E. coli O157:H− 3072/96 and E. coli O104:H4 C227–11φcu grown in lamb’s lettuce medium vs. M9 minimal medium, based on the respective reference genome of each strain

From: Differential transcriptome analysis of enterohemorrhagic Escherichia coli strains reveals differences in response to plant-derived compounds

 

E. coli O157:H7 str. Sakai

E. coli O157:H− str. 3072/96

E. coli O104:H4 str. C227–11φcu

Plasmid genes total (up/down)

5 (3/2)

10 (4/6)

33 (6/27)

Chromosomal genes total (%)

1694 (31.62)

1487 (24.45)

1002 (17.99)

Chromosomal genes upregulated (%)

854 (15.94)

803 (13.20)

480 (8.62)

Chromosomal genes downregulated (%)

840 (15.68)

684 (11.25)

522 (9.37)