From: Quorum sensing in thermophiles: prevalence of autoinducer-2 system
Phylum | Bacteria | LuxS | Pfs | LuxP | LsrB | RbsB | SAH hydrolase | Possible role |
---|---|---|---|---|---|---|---|---|
Identity (%) | ||||||||
Aquificae | Desulfurobacterium thermolithotrophum | – | – | – | – | – | 43 | Metabolism (Detoxification of SAH) |
Desulfurobacterium atlanticum | – | – | – | – | – | – | Could not be determined | |
Desulfurobacterium pacificum | – | – | – | – | – | – | Could not be determined | |
Sulfurihydrogenibium yellowstonense | – | – | – | – | – | 43 | Metabolism (Detoxification of SAH) | |
Sulfurihydrogenibium azorense | – | – | – | – | – | 42 | Metabolism (Detoxification of SAH) | |
Sulfurihydrogenibium subterraneum | – | – | – | – | – | 42 | Metabolism (Detoxification of SAH) | |
Thermovibrio ammonificans | – | – | – | – | – | 42 | Metabolism (Detoxification of SAH) | |
Thermovibrio ruber | – | – | – | – | – | – | Could not be determined (Unknown) | |
Bacteroides | Anaerophaga thermohalophila | – | – | – | – | 24 | 63 | D-ribose transporter and metabolism (Detoxification of SAH) |
Chloroflexi | Chloroflexus aurantiacus | – | – | – | – | – | – | Could not be determined |
Chloroflexus aggregans | – | – | – | – | 52 | 43 | D-ribose transporter and metabolism (Detoxification of SAH) | |
Thermomicrobium roseum | – | – | – | – | – | 43 | Metabolism (Detoxification of SAH) | |
Deferribacteres | Deferribacter thermophilus | – | – | – | – | – | – | Could not be determined |
Deferribacter desulfuricans | – | – | – | – | – | 40 | Metabolism (Detoxification of SAH) | |
Deferribacter autotrophicus | – | – | – | – | – | – | Could not be determined | |
Deinococcus-Thermus | Marinithermus hydrothermalis | 42 | – | – | – | – | 42 | AI-2 synthesis and metabolism (Detoxification of SAH) |
Meiothermus ruber | 42 | 29 | – | – | 31 | – | AI-2 synthesis | |
Meiothermus silvanus | 43 | 36 | – | 39 | 33 | 43 | AI-2 synthesis and metabolism | |
Meiothermus chliarophilus | 44 | 33 | – | – | 32 | 41 | AI-2 synthesis and metabolism | |
Meiothermus taiwanesis | 42 | – | – | – | – | – | AI-2 synthesis | |
Meiothermus cerbereus | 41 | – | – | – | – | – | AI-2 synthesis | |
Meiothermus rufus | 39 | – | – | – | – | – | AI-2 synthesis | |
Oceanithermus profundus | 42 | – | – | 62 | 39 | – | AI-2 synthesis | |
Thermus filiformis | 42 | 31 | – | – | – | – | AI-2 synthesis | |
Thermus parvatiensis | 40 | 32 | – | – | – | – | AI-2 synthesis | |
Thermus caliditerrae | 40 | 34 | – | – | – | – | AI-2 synthesis | |
Thermus oshimai | 42 | 31 | – | – | – | – | AI-2 synthesis | |
Thermus igniterrae | 41 | 33 | – | – | – | – | AI-2 synthesis | |
Thermus scotoductus | 41 | 32 | – | – | – | – | AI-2 synthesis | |
Thermus thermophilus | 39 | 32 | – | – | – | – | AI-2 synthesis | |
Thermus amyloliquefaciens | 40 | 35 | – | – | – | – | AI-2 synthesis | |
Thermus islandicus | 40 | 34 | – | – | 49 | – | AI-2 synthesis | |
Thermus aquaticus | 40 | – | – | – | – | – | AI-2 synthesis | |
Dictyoglomi | Dictyoglomus thermophilum | – | – | – | – | – | 36 | Metabolism (Detoxification of SAH) |
Firmicutes | Ammonifex thiophilus | – | – | – | – | – | – | Could not be determined |
Ammonifex degensii | – | – | – | – | – | 36 | Metabolism (Detoxification of SAH) | |
Anoxybacillus geothermalis | 39 | 55 | – | 30 | 58 | – | AI-2 synthesis | |
Anoxybacillus thermarum | 36 | 56 | – | – | – | – | AI-2 synthesis | |
Anoxybacilllus amylolyticus | 39 | 56 | – | – | 59 | – | AI-2 synthesis | |
Anoxybacillus suryakundensis | 36 | 55 | – | – | – | – | AI-2 synthesis | |
Anoxybacillus flavithermus | 37 | 56 | – | – | 59 | – | AI-2 synthesis | |
Caldanaerobacter subterraneus | – | – | – | 25 | 59 | – | Sugar ABC transporter | |
Caldanaerobacter uzonensis | – | – | – | – | – | – | Could not be determined | |
Caldicellulosiruptor saccharolyticus | – | – | – | – | – | 39 | Metabolism (Detoxification of SAH) | |
Caldicellulosiruptor kronotskyensis | – | – | – | – | – | 39 | Metabolism (Detoxification of SAH) | |
Caldicellulosiruptor bescii | – | – | – | – | – | 38 | Metabolism (Detoxification of SAH) | |
Carboxydothermus hydrogenoformans | – | – | – | – | – | 39 | Metabolism (Detoxification of SAH) | |
Carboxydothermus ferrireducens | – | – | – | – | – | 39 | Metabolism (Detoxification of SAH) | |
Coprothermobacter proteolyticus | – | – | – | – | 61 | 37 | D-ribose transporter and Metabolism (Detoxification of SAH) | |
Coprothermobacter platensis | – | – | – | – | – | 39 | Metabolism (Detoxification of SAH) | |
Geobacillus caldoxylosilyticus | 40 | 54 | – | – | – | – | AI-2 synthesis | |
Geobacillus stearothermophilus | 39 | 53 | – | – | 58 | – | AI-2 synthesis | |
Geobacillus thermoglucosidasius | 38 | 53 | – | – | 57 | – | AI-2 synthesis | |
Geobacillus kaustophilus | 39 | 55 | – | – | 58 | – | AI-2 synthesis | |
Geobacillus subterraneus | 38 | 54 | – | – | – | – | AI-2 synthesis | |
Geobacillus icigianus | 39 | 55 | – | – | 57 | – | AI-2 synthesis | |
Geobacillus thermoleovorans | 39 | 55 | – | – | 58 | – | AI-2 synthesis | |
Geobacillus thermonitrificans | 38 | 55 | – | – | 57 | – | AI-2 synthesis | |
Halothermothrix orenii | – | – | – | – | 37 | – | Metabolism (Detoxification of SAH) | |
Moorella thermoacetica | – | – | – | 29 | 29 | 36 | Sugar ABC transporter and Metabolism (Detoxification of SAH) | |
Natranaerobius thermophilus | – | – | – | – | 59 | 39 | D-ribose transporter and Metabolism (Detoxification of SAH) | |
Pelotomaculum thermopropionicum | – | – | – | – | – | 39 | Metabolism (Detoxification of SAH) | |
Thermosediminibacter oceani | 39 | 37 | – | – | 29 | – | AI-2 synthesis | |
Thermoanaerobacter kivui | 40 | 43 | – | – | 62 | – | AI-2 synthesis | |
Thermoanaerobacter thermocopriae | 42 | 41 | – | – | 61 | – | AI-2 synthesis | |
Thermoanaerobacterium thermosaccharolyticum | 42 | 43 | – | – | 55 | – | AI-2 synthesis | |
Thermoanaerobacterium saccharolyticum | 43 | 47 | – | – | – | – | AI-2 synthesis | |
Thermoanaerobacterium aotearoense | 43 | 46 | – | – | – | – | AI-2 synthesis | |
Thermoanaerobacterium xylanolyticum | 43 | 46 | – | – | – | – | AI-2 synthesis | |
Thermosinus carboxydivorans | – | – | – | – | – | 38 | Metabolism (Detoxification of SAH) | |
Nitrospirae | Thermodesulfovibrio aggregans | – | – | – | – | – | 41 | Metabolism (Detoxification of SAH) |
Thermodesulfovibrio thiophilus | – | – | – | – | – | 41 | Metabolism (Detoxification of SAH) | |
Thermodesulfovibrio hydrogeniphilus | – | – | – | – | – | – | Could not be determined | |
Proteobacteria | Caminibacter mediatlanticus | 55 | 36 | – | – | – | – | AI-2 synthesis |
Caminibacter profundus | – | – | – | – | – | – | Could not be determined | |
Caminibacter hydrogeniphilus | – | – | – | – | – | – | Could not be determined | |
Desulfacinum hydrothermale | – | – | – | – | – | – | Could not be determined | |
Desulfacinum infernurn | – | – | – | – | – | – | Could not be determined | |
Hippea maritime | – | – | – | – | – | 42 | Metabolism (Detoxification of SAH) | |
Hippea jasoniae | – | – | – | – | – | 41 | Metabolism (Detoxification of SAH) | |
Hippea alviniae | – | – | – | – | – | 42 | Metabolism (Detoxification of SAH) | |
Nitratiruptor SB155-S | 66 | 34 | – | – | – | – | AI-2 synthesis | |
Thermochromatium tepidum | – | – | – | – | – | – | Could not be determined | |
Thermodesulfobacteria | Fervidobacterium islandicum | – | 27 | – | – | 51 | 37 | D-ribose transporter and metabolism |
Fervidobacterium gondwanense | – | – | – | – | – | – | Could not be determined | |
Fervidobacterium changbaicum | – | – | – | – | – | – | Could not be determined | |
Fervidobacterium nodosum | – | 27 | – | – | – | 37 | Metabolism (Detoxification of SAH) | |
Kosmotoga pacifica | – | – | – | – | 53 | – | D-ribose transporter | |
Kosmotoga olearia | – | – | – | – | 53 | – | D-ribose transporter | |
Kosmotoga arenicorallina | – | – | – | – | 49 | – | D-ribose transporter | |
Marinitoga piezophila | – | – | – | – | – | 36 | Metabolism (Detoxification of SAH) | |
Marinitoga camini | – | – | – | – | – | – | Could not be determined | |
Marinitoga hydrogenitolerans | – | – | – | – | – | – | Could not be determined | |
Petrotoga mobilis | – | – | – | – | 53 | 36 | D-ribose transporter and metabolism (Detoxification of SAH) | |
Petrotoga mexicana | – | – | – | – | – | – | Could not be determined | |
Petrotoga halophila | – | – | – | – | – | – | Could not be determined | |
Thermococcoides sp. | – | – | – | – | – | – | Could not be determined | |
Thermodesulfatator indicus | – | – | – | – | – | 40 | Metabolism (Detoxification of SAH) | |
Thermodesulfatator atlanticus | – | – | – | – | – | 41 | Metabolism (Detoxification of SAH) | |
Thermodesulfatator autotrophicus | – | – | – | – | – | 40 | Metabolism (Detoxification of SAH) | |
Thermosipho africanus | – | – | – | – | 50 | 38 | D-ribose transporter and metabolism (Detoxification of SAH) | |
Thermosipho melanesiensis | – | 28 | – | – | – | 38 | Metabolism (Detoxification of SAH) | |
Thermotoga petrophila | – | 32 | – | – | 49 | – | D-ribose transporter and metabolism | |
Thermotoga maritime | – | 31 | – | – | 26 | 37 | D-ribose transporter and metabolism (Detoxification of SAH) | |
Thermotoga neopolitana | – | 30 | – | – | 36 | 38 | D-ribose transporter and metabolism (Detoxification of SAH) | |
Thermotoga naphthophila | – | 32 | – | 33 | 48 | 38 | Sugar ABC transporter and metabolism (Detoxification of SAH) |