From: Detection of CTX-M-15 harboring Escherichia coli isolated from wild birds in Tunisia
E. coli isolates | Species | Region of the sample | Virulence factors | Phylogroup | ESBL and genetic environment | Resistance phenotype to non-beta-lactam antibiotics | Other resistance genes detected | Replicons | PFGE | MLST |
---|---|---|---|---|---|---|---|---|---|---|
CbR33 | European serin | Bizerte | fimA-papC aer | A | ISEcp1-bla CTX-M-15-orf477 | NAL-C-SXT-TET-STR-CIP | tet(A), qnrA1, qnrB1, aac(6’)Ib-cr, aac(3)II | HI2, W, FIC, FIB, P | P3 | New STa |
CbR35 | European serin | Bizerte | fimA-eae | A | ISEcp1-bla CTX-M-15-orf477 | NAL-C-SXT-TET-STR-CIP | tet(A), qnrA1, qnrB1, aac(3)II | HI2, W, FIC, FIB, P, A/C | P3 | New STa |
CbR37 | European serin | Bizerte | fimA-papC-aer | A | ISEcp1-bla CTX-M-15-orf477 | NAL-C-SXT-TET-STR-CIP | blaTEM-1b, tet(A), qnrA1, qnrB1, aac(6’)Ib-cr, aac(3)II | HI2, W, FIC, FIB, P, A/C | P3 | New STa |
CbR38 | European Greenfinch | Bizerte | fimA-papC aer | A | ISEcp1-bla CTX-M-15-orf477 | NAL-C-SXT-TET-STR-CIP | tet(A), qnrA1, qnrB1, aac (6’)Ib-cr,aac(3)II | HI2, W, FIC, FIB, P, A/C | P3 | New STa |
CbR39 | European Goldfinch | Bizerte | fimA-papC | A | ISEcp1-bla CTX-M-15-orf477 | NAL-C-SXT-TET-STR-CIP | blaTEM-1b, tet(A), qnrA1, qnrB1, aac (6’)Ib-cr, aac(3)II | HI2, W, FIC, FIB, P, A/C | P3 | New STa |
CbR40 | European Greenfinch | Bizerte | fimA | A | ISEcp1-bla CTX-M-15-orf477 | NAL-C-SXT-TET-STR-CIP | blaTEM-1b, tet(A), qnrA1,qnrB1, aac(3)II | HI2, W, FIC, FIB, P, A/C | P3 | New STa |
CbR44 | Herring Gulls | Bizerte | fimA-papC | A | ISEcp1-bla CTX-M-15-orf477 | NAL-C-SXT-TET-STR-CIP | tet(A), qnrA1,qnrB1, aac (6’)Ib-cr, aac(3)II | HI2, W, FIC, FIB, P, A/C | P3 | New STa |
Cb11 | European Goldfinch | Bizerte | fimA-papC | A | ISEcp1-bla CTX-M-15 -orf477 | NAL-C-SXT-TET-STR-CIP | blaTEM-1b, sul3, tet(A), qnrA1, qnrB1, aac(3)II | HI2, W, FIC, A/C | P3 | New STa |
Cb36 | European serin | Bizerte | fimA -aer | A | ISEcp1-bla CTX-M-15 -orf477 | NAL-C-SXT-TET-STR-CIP | sul3 , tet(A), qnrB1, aac(3)II | L/M, W | P2 | ST 297 |
Cb37 | European serin | Bizerte | fimA-papC-aer | A | ISEcp1-bla CTX-M-15-orf477 | NAL-C-SXT-TET-STR-CIP | tet(A), qnrB1, aac (6’)Ib-cr, aac(3)II | HI2, W, FIC, FIB, X, A/C | P4 | New STb |
Cb62 | European Goldfinch | Menzel Bouzalfa | fimA | A | ISEcp1-bla CTX-M-15-orf477 | – | – | I1,W, FIC, FIB, | P1 | ST 410 |
Cb68 | European Bee-eaters | Menzel Bouzalfa | fimA | B2 | ISEcp1-bla CTX-M-15-orf477 | – | – | FIC | P5 | ST 349 |