Table 5 Definition of dominant KEGG modules (> 1.0%) in the two soil samples
From: Metagenomic analysis of microbial community and function involved in cd-contaminated soil
Module | Definition |
|---|---|
M00009 | Citrate cycle (TCA cycle, Krebs cycle) [PATH:map01200 map00020] |
M00178 | Ribosome, bacteria [PATH:map03010] |
M00173 | Reductive citrate cycle (Arnon-Buchanan cycle) [PATH:map01200 map00720] |
M00237 | Branched-chain amino acid transport system [PATH:map02010] [BR:ko02000] |
M00374 | Dicarboxylate-hydroxybutyrate cycle [PATH:map01200 map00720] |
M00011 | Citrate cycle, second carbon oxidation, 2-oxoglutarate = > oxaloacetate [PATH:map01200 map00020] |
M00239 | Peptides/nickel transport system [PATH:map02010] |
M00376 | 3-Hydroxypropionate bi-cycle [PATH:map01200 map00720] |
M00048 | Inosine monophosphate biosynthesis, PRPP + glutamine = > IMP [PATH:map00230] |
M00570 | Isoleucine biosynthesis, threonine = > 2-oxobutanoate = > isoleucine [PATH:map01230 map00290] |
M00017 | Methionine biosynthesis, aspartate = > homoserine = > methionine [PATH:map01230 map00270] |
M00335 | Sec (secretion) system [PATH:map03070] |
M00019 | Valine/isoleucine biosynthesis, pyruvate = > valine / 2-oxobutanoate = > isoleucine [PATH:map01210 map01230 map00290] |
M00051 | Uridine monophosphate biosynthesis, glutamine (+ PRPP) = > UMP [PATH:map00240] |
M00087 | beta-Oxidation [PATH:map01212 map00071] |
M00307 | Pyruvate oxidation, pyruvate = > acetyl-CoA [PATH:map01200 map00010 map00020 map00620] |