Gene | RPKM I | RPKM E | log2FC | p-value | Observations |
---|---|---|---|---|---|
Genes upregulated in isolation condition | |||||
VP1512 | 1104 | 29 | 5.7 | 5.0E−83 | Hypothetical protein |
VP1513 | 392 | 11 | 5.6 | 1.1E−89 | Formate dehydrogenase large subunit |
VP1514 | 357 | 10 | 5.5 | 1.9E−79 | Formate dehydrogenase, iron-sulfur subunit. Interaction with 4Fe-4S |
VP1515 | 216 | 5 | 5.9 | 1.6E- 141 | Formate dehydrogenase, cytochrome b556 subunit. Membrane protein |
VP1516 | 671 | 16 | 5.9 | 8.2E- 219 | Hypothetical protein |
VPA1634 | 2140 | 8 | 8.5 | 0 | Putrescine transporter |
VPA1635 | 3652 | 16 | 8.4 | 0 | Ornithine decarboxylase, initial enzyme in polyamine synthesis |
VPA0040 | 679 | 9 | 6.7 | 1.5E- 289 | Hypothetical protein |
VP0061 | 330 | 7 | 6.0 | 4.1E- 130 | Multidrug transmembrane resistance signal peptide protein |
VPA0475 | 1764 | 5 | 8.8 | 6.1E- 228 | Hypothetical protein |
Genes downregulated in isolation condition | |||||
VP1393 | 19 | 4134 | −7.2 | 0 | BfdA, Hcp1 |
VP1777 | 0 | 14 | -7.1 | 4.1E−24 | Aldehyde dehydrogenase Oxidation of acetaldehyde NAD or NADP reduction |
VP1783 | 0 | 51 | -7.7 | 3.1E−29 | Hypothetical protein |
VP1794 | 0 | 29 | -7.5 | 6.6E−23 | Hypothetical protein |
VP1796 | 0 | 21 | -7.2 | 4.7E−25 | Hypothetical protein |
VP1067 | 0 | 10 | -7.1 | 6.6E−20 | Hypothetical protein |
VP1068 | 1 | 178 | -7.0 | 9.0E- 114 | Hypothetical protein |
VP1400 | 1 | 207 | -7.5 | 3.5E- 248 | Hypothetical protein |
VP1072 | 1 | 142 | -7.2 | 1.1E- 186 | Helicase |
VPA1424 | 2 | 492 | −7.2 | 0 | Fructose transport |