De novo transcriptomic analysis of Chlorella sorokiniana reveals differential genes expression in photosynthetic carbon fixation and lipid production

Table 5 Differential gene expression in Calvin cycle

Product	Gene name	EC number	Trinity ID	Log₂FC^a
ribulose-bisphosphate carboxylase large chain	RBCL	EC:4.1.1.39	comp10529_c0_seq1	2.44
fructose-bisphosphate aldolase, class I	ALDO	EC:4.1.2.13	comp12064_c4_seq2	1.41
sedoheptulose-1,7-bisphosphatase	SEBP	EC:3.1.3.37	comp8533_c0_seq1	1.22
transketolase	TRK	EC:2.2.1.1	comp12612_c0_seq1	0.35
ribose 5-phosphate isomerase A	RPIA	EC:5.3.1.6	comp14985_c0_seq1	0.57
phosphoribulokinase	RPK	EC:2.7.1.19	comp13013_c0_seq1	2.22
ribulose-phosphate 3-epimerase	RPE	EC:5.1.3.1	comp12802_c0_seq1	1.65
phosphoglycerate kinase	PGK	EC:2.7.2.3	comp11827_c0_seq2	3.41
glyceraldehyde-3-phosphate dehydrogenase	GAPDH	EC:1.2.1.13	comp11943_c0_seq2	1.75
triosephosphate isomerase	TPI	EC:5.3.1.1	comp8453_c0_seq1	−0.29
fructose-1,6-bisphosphatase	FBPase	EC:3.1.3.11	comp10769_c0_seq3	1.56

^a \( \mathrm{Log}2\mathrm{F}\mathrm{C}= Log2\left(\frac{FPKM\ light}{ FPKM dark}\right) \)

ISSN: 1471-2180