Use of multilocus sequence typing to infer genetic diversity and population structure of Lactobacillus plantarum isolates from different sources

Table 1 Descriptive analysis of MLST data genetic variability at L. plantarum loci

Gene		No. of		π^a/site	G + C content (mol%)			d _N/d _S ^b
Gene	Length (bp)	Alleles	Polymorphic sites	π^a/site	G + C content (mol%)	sSNP	nSNP	d _N/d _S ^b
clpX	443	9	8	0.00401	45.77 %	7	1	0.0429
groEL	641	11	63	0.03220	43.93 %	6	59	0.0177
murC	462	11	10	0.00502	43.66 %	5	4	0.2692
murE	607	15	22	0.00855	51.38 %	16	6	0.0436
pheS	536	12	15	0.00693	46.09 %	10	5	0.0648
pyrG	415	7	9	0.00803	43.28 %	8	1	0.0255
recA	546	9	10	0.00549	45.00 %	10	0	0
uvrC	620	12	21	0.01166	43.10 %	18	3	0.0279
concatenated	4251	80	158	0.00464	45.28 %	80	79	0.0401

ISSN: 1471-2180