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Fig. 2 | BMC Microbiology

Fig. 2

From: A multilocus sequence analysis scheme for characterization of Flavobacterium columnare isolates

Fig. 2

Phylogenetic tree of F. columnare strains based on a concatenated 6-housekeeping gene (trpB, tuf, atpA, rpoD, gyrB and dnaK). Strict consensus Neighbour Joining tree for the 83 F. columnare strains from Finland and three other strains, including the type strain NCIMB 2248T, ATCC 49512, and strain JIP39/87. The numbers at the nodes represent levels (%) of bootstrap support from 1000 resampled datasets. The sequence of the Flavobacterium psychrophilum (JIP 02/86) strain from France was used as an out-group. MLSA clusters (designated in accordance with the corresponding ARISA genotypes) C, E, A, H, and G are marked with purple, green, orange, light blue, and pink, respectively. Branches from Finnish lineage I strains are coloured red, those from lineage II are coloured blue, and those from other countries are coloured black

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