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Table 3 Descriptive analysis of MLST data genetic variability at Streptococcus thermophilus loci

From: Multilocus sequence typing of Streptococcus thermophilus from naturally fermented dairy foods in China and Mongolia

Gene

No. of

πa/site

G + C content (mol %)

d N /d S b

alleles

polymorphic sites

carB

10

10

0.0050

43.49

0.1439

clpX

18

20

0.0055

41.62

0.0789

dnaA

9

12

0.0054

36.89

0.0819

murC

9

8

0.0047

40.45

0.0360

murE

14

19

0.0048

41.64

0.0910

pepN

17

14

0.0056

44.14

0.1734

pepX

15

16

0.0053

41.97

0.2239

pyrG

12

12

0.0055

42.07

0.0311

recA

7

8

0.0043

39.08

0.0807

rpoB

13

13

0.0040

43.41

0.1046

  1. a: Mean pairwise nucleotide difference per site
  2. b: d N/d S represents the ratio of nonsynonymous to synonymous substitutions