Table 5 Simpson’s diversity index of each MLVA loci
MLVA locus | DI (95 % CI) for DT1 (n = 180) | DI (95 % CI) for U277 (n = 33) | DI (95 % CI) for DT 104 (n = 32) | DI (95 % CI) for all DTs (n = 375) | k-value for all DTs |
|---|---|---|---|---|---|
STTR9 | 0.065 (0.015-0.115) | 0.000 (0.000-0.189) | 0.119 (0.000-0.271) | 0.328 (0.298-0.358) | 7 |
STTR5 | 0.574 (0.499-0.648) | 0.571 (0.418-0.724) | 0.742 0.652-0.833) | 0.795 (0.780-0.811) | 19 |
STTR6 | 0.097 (0.037-0.157) | 0.000 (0.000-0.189) | 0.807 (0.706-0.908) | 0.494 (0.462-0.527) | 21 |
STTR10 | 0.076 (0.022-0.129) | 0.059 (0.000-0.169) | 0.752 (0.655-0.849) | 0.408 (0.375-0.441) | 20 |
STTR3 | 0.211 (0.135-0.288) | 0.298 (0.130-0465) | 0.225 (0.042-0.407) | 0.438 (0.409-0.467) | 10 |