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Table 2 Genes upregulated in the inoculated P.gingivalis W83

From: Gene expression changes in Porphyromonas gingivalis W83 after inoculation in rat oral cavity

Locus no.

Putative identificationα

Cellular roleα

Fold

PG0102

hypothetical protein

 

3.7076

PG2116

hypothetical protein

 

3.6850

PG1007

GntR family transcriptional regulator

Regulatory functions: DNA interactions

3.6786

PG0265

hypothetical protein

 

3.3714

PG1008

hypothetical protein

 

3.3338

PG1510

hypothetical protein

 

3.0890

PG1009

hypothetical protein

 

3.0258

PG1655

hypothetical protein

 

2.8935

PG0132

hypothetical protein

 

2.7298

PG2114

hypothetical protein

 

2.6986

PG2064

hypothetical protein

 

2.5952

PG1010

ABC transporter, ATP-binding protein

Transport and binding proteins: Unknown substrate

2.4885

PG0542

hypothetical protein

 

2.4794

PG1005

putative lipoprotein

Cell envelope

2.4686

PG1514

glycerol dehydrogenase-related protein

Unknown function: General

2.4537

PG0844

hypothetical protein

 

2.4324

PG0874

mobilizable transposon, int protein

Mobile and extrachromosomal element functions: Transposon functions

2.4307

PG0507

hypothetical protein

 

2.4290

PG1357

hypothetical protein

 

2.3151

PG1410

hypothetical protein

 

2.3094

PG0617

hypothetical protein

 

2.2814

PG0855

hypothetical protein

 

2.2153

PG0009

ISPg5, transposase Orf1

Mobile and extrachromosomal element functions: Transposon functions

2.1609

PG0427

ISPg5, transposase Orf1

Mobile and extrachromosomal element functions: Transposon functions

2.1431

PG0942

ISPg5, transposase Orf1

Mobile and extrachromosomal element functions: Transposon functions

2.1424

PG0541

hypothetical protein

 

2.1291

PG1398

hypothetical protein

 

2.1216

PG1027

hypothetical protein

 

2.1204

PG0590

ISPg5, transposase Orf1

Mobile and extrachromosomal element functions: Transposon functions

2.1151

PG1006

hypothetical protein

 

2.1122

PG0340

hypothetical protein

 

2.1119

PG0256

CvpA family protein

Unknown function: General

2.1090

PG0749

hypothetical protein

 

2.0834

PG1662

hypothetical protein

 

2.0788

PG2220

hypothetical protein

 

2.0771

PG1871

hypothetical protein

 

2.0589

PG2187

1,4-dihydroxy-2-naphthoate octaprenyltransferase

Biosynthesis of cofactors, prosthetic groups, and carriers: Menaquinone and ubiquinone

2.0471

PG0410

hypothetical protein

 

2.0409

PG1233

hypothetical protein

 

2.0367

PG0325

hypothetical protein

 

2.0349

PG0409

hypothetical protein

 

2.0259

PG1513

phosphoribosyltransferase, putative/phosphoglycerate mutase family protein

Energy metabolism: Other

2.0032

  1. αLocus number, identification and functional classification according to JCVI P.gingivalis genome database