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Table 2 PCR conditions for the detection of the genes specific to the strains used in the in vivo chicken colonization competition assay

From: Extensive characterization of Campylobacter jejuni chicken isolates to uncover genes involved in the ability to compete for gut colonization

Gene

Primers (5′–3′)

Cycle

pseD

F: GATGGAATGGTAAGCGTTGCACA

95°C for 20 s

 

R: TTATCCTTGCTCCACCTTCGGTGC

56°C for 20 s

  

72°C for 20 s

virB11

F: TCTTGTGAGTTGCCTTACCCCTTTT

95°C for 20 s

 

R: CCTGCGTGTCCTGTGTTATTTACCC

65°C for 20 s

  

72°C for 20 s

CJ0144

F: TTCATGAAGTTGTGAATGCTGAAA

95°C for 20 s

 

R: TCGCTTACAACAAGTTCGCC

61°C for 20 s

  

72°C for 10 s

  1. All PCR cycles were preceded by an initial denaturation step consisting of a 15-min incubation at 95°C; All PCR runs were ended by a final 5-min elongation step at 72°C followed by a denaturation curve analysis.