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Table 1 Comparison of MLST profile of Wolbachia from cassava B. tabaci with those from the pubMLST database, specimens in bold were generated in this study

From: Prevalence and genetic diversity of endosymbiotic bacteria infecting cassava whiteflies in Africa

Host

Super group

Country

coxA

fbpA

ftsZ

gatB

hcpA

Sequence type

B. tabaci (SSA1-SG1)

B

Uganda

14

4

73

4

3

423*

B. tabaci (SSA1-SG2)

B

Malawi, Uganda

14

4

73

4

3

423*

B. tabaci (SSA1-SG3)

B

Tanzania, Malawi

88

9

105

9

106

424*

B. tabaci (SSA1-SG3)

B

Tanzania

88

404*

105

9

106

425*

B. tabaci (SSA1-SG5)

B

Nigeria

88

----

-----

-----

----

 

B. afer

B

Nigeria

88

89

198*

105

106

427*

B. tabaci (MED)

B

USA

88

165

7

105

106

166

B. tabaci (China I)

B

China

88

9

170

207

13

377

B. tabaci (Asia II 1)

B

China

88

390

170

207

234

391

B. tabaci (China 1)

B

China

88

9

170

105

13

379

B. tabaci (Asia II 7)

B

China

88

387

7

105

106

378

B. tabaci (Asia 1)

B

China

88

387

182

207

106

395

B. tabaci (Australia)

B

Australia

88

9

170

207

221

380

B. tabaci (Asia II 9)

B

China

88

386

170

207

13

384

Eretmocerus sp. nr. emiratus

B

USA

14

4

73

105

3

161

Hypolimnus bolina

B

Japan

14

4

73

4

40

125

Telicada nyseus

B

India

14

4

73

4

40

125

Spodoptera exempta

B

Tanzania

14

4

73

4

40

125

Cepora nerissa

B

India

14

4

36

4

3

145

  1. ‘*’New additions of Wolbachia sequence types to the database by this study, and ‘----’ failure to amplify genes in PCR amplifications.