Skip to main content

Table 3 Profiling of antibiotic resistance genes in O104 and other STEC strains

From: Genome sequencing and comparative genomics provides insights on the evolutionary dynamics and pathogenic potential of different H-serotypes of Shiga toxin-producing Escherichia coli O104

Serotype

Strain name

Chromosome- and/or plasmid-encoded antibiotic resistance genes

mdtL

vancomycin

beta-lactamase

emrE

ksgA

emrB/QacA

mdtG

mdaB

ydeB

dacC

folA-O157

gentamicin resistance protein*

streptomycin 3’-kinase*

tetA (class A) *

tetA (class D) *

folA

beta-lactamase2*

aph*

erythromycin resistance repressor*

floR*

O104:H7

RM9387

+

+

-

+

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O104:H21

94-3024

+

+

-

-

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O104:H21

BAA-178 (CDC 1994-3024) (CFSAN002236)

+

+

-

-

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O104:H21

BAA-182 (CDC 1994-3023) (CFSAN002237)

+

+

-

-

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O104:H4

2009EL-2050

+

+

+

+

+

+

+

+

+

+

+

-

+

+

-

-

-

-

-

-

O104:H4

2009EL-2071

+

+

+

+

+

+

+

+

+

+

+

-

+

-

-

-

-

-

-

-

O104:H4

2011C-3493

+

+

+

+

+

+

+

+

+

+

+

-

+

+

-

-

+

-

-

-

O104:H4

LB226692

+

+

+

+

+

+

+

+

+

+

+

-

+

+

-

-

+

-

-

-

O104:H4

TY-2482

+

+

+

+

+

+

+

+

+

+

+

-

+

+

-

-

+

-

-

-

O104:H4

C760-09

+

+

+

-

+

+

+

+

+

+

-

-

+

-

-

-

-

-

-

-

O104:H4

C777-09

+

+

+

-

-

+

+

-

-

+

+

-

+

-

-

-

-

-

-

-

O104:H4

C734-09

+

+

+

-

+

+

+

-

+

+

-

-

+

+

-

-

-

-

-

-

O104:H4

C754-09

-

-

+

-

-

+

+

-

-

-

-

-

+

-

-

-

-

-

-

-

O157:H7

Sakai

+

+

-

-

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O145:H28

4865/96

+

+

-

-

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O45:H2

03-EN-705

+

+

-

-

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O113:H21

CL-3

+

+

-

-

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O26:H11

Str. 11368

+

+

-

-

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O121:H19

MT#2

+

+

-

-

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O103:H2

Str. 12009

+

+

-

-

+

+

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O111:H-

11128

+

+

+

+

+

+

+

+

+

+

+

-

+

-

-

-

-

-

-

-

O111:H21

Str. 226

+

+

-

-

+

-

+

+

+

+

+

-

-

-

-

-

-

-

-

-

O91:H21

B2F1

+

+

-

+

+

-

+

+

+

+

+

-

-

-

-

-

-

-

-

-

  1. *: plasmid-encoded.