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Table 2 Classification of L. ruminis strains according to sequence types

From: Lactobacillus ruminis strains cluster according to their mammalian gut source

Host

Strain

ST*

Allele number at each locus

ftsQ

nrdB

parB

pheS

pstB

rpoA

Bovine

ATCC 27782

1

1

1

1

1

1

1

Human

L5

2

2

2

2

2

2

2

S21

2

2

2

2

2

2

2

S36

2

2

2

2

2

2

2

S23

3

3

3

2

3

3

3

S38

4

3

4

3

3

4

3

ATCC 25644

5

3

5

4

4

5

2

Bovine

ATCC 27780

6

4

6

1

5

1

4

ATCC 27781

6

4

6

1

5

1

4

Porcine

DPC 6830

7

1

1

5

6

1

1

DPC 6831

7

1

1

5

6

1

1

Equine

DPC 6832

8

5

7

6

7

6

5

DPC 6834

8

5

7

6

7

6

5

DPC 6836

8

5

7

6

7

6

5

DPC 6833

9

6

8

6

8

7

6

DPC 6835

9

6

8

6

8

7

6

  1. *Sequence type,
  2. Note: A combination of six alleles defines an allelic profile and each unique allelic profile represents a sequence type.