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Table 4 Real-time PCR results obtained using the available bacterial strains

From: Molecular beacon-based real-time PCR detection of primary isolates of Salmonella Typhimurium and Salmonella Enteritidis in environmental and clinical samples

  

PCR Resultb

Bacterial straina

Reference ID

IACc

invA

prot6E

fliC

Salmonella Enteritidis

CVS-140/1

 

+

+

-

Salmonella Enteritidis

CVS-141/1–5

 

+

+

-

Salmonella Enteritidis

CVS-4054/1

 

+

+

-

Salmonella Enteritidis

CVS-4311/1

 

+

+

-

Salmonella Enteritidis

CVS-4325/4, 5

 

+

+

-

Salmonella Enteritidis

CVS-4421/1

 

+

+

-

Salmonella Enteritidis

CVS-4516/1

 

+

+

-

Salmonella Enteritidis

CVS-4532/1

 

+

+

-

Salmonella Enteritidis

CVS-4540/1

 

+

+

-

Salmonella Enteritidis

CVS-4666/1

 

+

+

-

Salmonella Enteritidis

CVS-4756/1

 

+

+

-

Salmonella Enteritidis

CVS-4807//1–3

 

+

+

-

Salmonella Enteritidis

CVS-4809/2

 

+

+

-

Salmonella Enteritidis

CVS-4980/1

 

+

+

-

Salmonella Enteritidis

CVS-5212/1

 

+

+

-

Salmonella Enteritidis

CVS-54/1

 

+

+

-

Salmonella Enteritidis

CVS-4792/1

 

+

+

-

Salmonella Enteritidis

CVS-4754/1

 

+

+

-

Salmonella Enteritidis

CVS-2553/4

 

+

+

-

Salmonella Typhimurium

CVS-3225//1–5

 

+

-

+

Salmonella Typhimurium

CVS-4074/1

 

+

-

+

Salmonella Typhimurium

CVS-4076/1

 

+

-

+

Salmonella Typhimurium

CVS-4255/1

 

+

-

+

Salmonella Typhimurium

CVS-4345/4, 5

 

+

-

+

Salmonella Typhimurium

CVS-4979/1

 

+

-

+

Salmonella Typhimurium

CVS-4981/1

 

+

-

+

Salmonella Typhimurium

CVS-5090/1

 

+

-

+

Salmonella Typhimurium

CVS-55/1

 

+

-

+

Salmonella Typhimurium

CVS-920/1–3

 

+

-

+

Salmonella Typhimurium

CVS-131/2

 

+

-

+

Salmonella Typhimurium

CVS-729/2

 

+

-

+

Salmonella Typhimurium

CVS-3794/1

 

+

-

+

Salmonella Typhimurium

CVS-3822/1

 

+

-

+

Salmonella Typhimurium

CVS-1421/1

 

+

-

+

Salmonella Typhimurium

14028

 

+

-

+

Salmonella Enteritidis

13076

 

+

+

-

Staphylococcus aureus

1803

 

-

-

-

Staphylococcus aureus

25923

 

-

-

-

Bacillus cereus

7464

 

-

-

-

Bacillus cereus

11145

 

-

-

-

Bacillus cereus

11778

 

-

-

-

Bacillus subtilis

110649

 

-

-

-

Enterobacter aerogenes

13048

 

-

-

-

Enterococcus faecalis

29212

 

-

-

-

Escherichia coli

25922

 

-

-

-

Escherichia coli O157

35150

 

-

-

-

Listeria innocua

11288

 

-

-

-

Listeria ivanovie

11846

 

-

-

-

Listeria ivanovie

19119

 

-

-

-

Listeria monocytogenes

11994

 

-

-

-

Micrococcus luteus

9341

 

-

-

-

Proteus vulgaris

13315

 

-

-

-

Pseudomonas aeruginosa

27853

 

-

-

-

Rhodococcus equi

1621

 

-

-

-

Salmonella Bredeney

1030/1

 

+

-

-

Salmonella Infantis

1030/4

 

+

-

-

Salmonella Anatum

1030/5

 

+

-

-

Salmonella Hadar

1030/6

 

+

-

-

Salmonella Newport

1030/7

 

+

-

-

Salmonella Typhimurium

1030/10

 

+

-

+

Salmonella Virchow

1030/11

 

+

-

-

Salmonella Enteritidis

1030/17

 

+

+

-

  1. aThe origin of these samples has been described in tables 1, 2 and 3.
  2. bDetectable real-time PCR amplification signal is denoted by the symbol (+) which indicates CT values ≤ 45. Undetectable signal (CT values >45) is denoted by (-) and indicates the absence of template DNA.
  3. cIAC is an artificial internal amplification control that does not correspond to any of the submitted sequences in the Genbank.