From: Classification of Myoviridae bacteriophages using protein sequence similarity
I. TEEQUATROVIRINAE | ||||
---|---|---|---|---|
Percent identity | ||||
1. The T4-like viruses | Accession No. | CoreExtractor | CoreGenes | |
 | T4-type phages |  |  |  |
 | Escherichia phage T4 | NC_000866 | 100 | 100.0 |
 | Escherichia phage JS10 | NC_012741 | Not determined | 72.7 |
 | Escherichia phage JS98 | NC_010105 | 77 | 74.1 |
 | Escherichia phage RB14 | NC_012638 | Not determined | 83.5 |
 | Escherichia phage RB32 | NC_008515 | 88 | 84.2 |
 | Escherichia phage RB51 | NC_012635 | Not determined | 85.6 |
 | Escherichia phage RB69 | NC_004928 | 73 | 73.4 |
 | 44RR2.8-type phages |  |  |  |
 | Aeromonas phage 44RR2.8t | NC_005135 | 100 | 100.0 |
 | Escherichia phage 31 | NC_007022 | 98 | 97.6 |
 | Aeromonas phage 25 | NC_008208 | 82 | 82.5 |
 | RB43-type phages |  |  |  |
 | Escherichia phage RB43 | NC_007023 | 100 | 100.0 |
 | Escherichia phage RB16 | Tulane | Not determined | 84.2 |
 | RB49-type phages |  |  |  |
 | Escherichia phage RB49 | NC_005066 | 100 | 100.0 |
 | Escherichia phage JSE | NC_012740 | Not determined | 93.6 |
 | Escherichia phage φ1 | NC_009821 | 97 | 97.1 |
2. The KVP40-like viruses | ||||
 | Vibrio phage KVP40 | NC_005083 | 100 | 100.0 |
 | Vibrio phage nt-1 | Tulane | Not determined | 80.8 |
 | Acinetobacter phage 133 | Tulane | Not determined | 39.9 |
 | Aeromonas phage Aeh1 | NC_005260 | 28 | 35.6 |
 | Aeromonas phage 65 | Tulane | Not determined | 34.9 |
II PEDUOVIRINAE | ||||
1. The P2-like viruses | ||||
 | Enterobacteria phage P2 | NC_001895 | 100 | 100.0 |
 | Enterobacteria phage Wφ | NC_005056 | 89 | 90.7 |
 | Yersinia phage L-413C | NC_004745 | 95 | 88.4 |
 | Enterobacteria phage 186 | NC_001317 | 72 | 74.4 |
 | Enterobacteria phage PsP3 | NC_005340 | 70 | 72.1 |
 | Salmonella Fels-2 | NC_010463 | 65 | 67.4 |
 | Salmonella SopEφ | AY319521 | Not determined | 62.8 |
 | Burkholderia phage φE202 | NC_009234 | 51 | 55.8 |
 | Mannheimia phage φ-MhaA1-PHL101 | NC_008201 | 51 | 55.8 |
 | Pseudomonas phage φCTX | NC_003278 | 53 | 53.5 |
 | Burkholderia phage φ52237 | NC_007145 | 49 | 51.2 |
 | Ralstonia phage RSA1 | NC_009382 | 49 | 51.2 |
 | Burkholderia phage φE12-2 | NC_009236 | 49 | 48.8 |
2. The HP1-like viruses | ||||
 | Haemophilus phage HP1 | NC_001697 | 100 | 100.0 |
 | Haemophilus phage HP2 | NC_003315 | 97 | 85.7 |
 | Pasteurella phage F108 | NC_008193 | 57 | 59.5 |
 | Vibrio phage K139 | NC_003313 | 51 | 54.8 |
 | Vibrio phage κ | NC_010275 | 49 | 54.8 |
 | Aeromonas phage ΦO18P | NC_009542 | 44 | 50.0 |
III. SPOUNAVIRINAE | ||||
1. The SPO1-like viruses | ||||
 | Bacillus phage SPO1 | NC_011421 | 100 | 100.0 |
2. The Twort-like viruses | ||||
 | Staphylococcus phage Twort | NC_007021 | 100 | 100.0 |
 | Staphylococcus phage K | NC_005880 | 74 | 43.5 |
 | Staphylococcus phage G1 | NC_007066 | 97 | 56.9 |
 | Listeria phage P100 | NC_007610 | 51 | 34.8 |
 | Listeria phage A511 | NC_009811 | 51 | 35.4 |
 | Peripherally related: |  |  |  |
 | Enterococcus phage φEC24C | NC_009904 | 32 | 31.8 |
 | Lactobacillus phage LP65 | NC_006565 | 25 | 26.2 |
OTHER ICTV-RECOGNIZED GENERA | ||||
1. The Mu-like viruses | ||||
 | Enterobacteria phage Mu | NC_000929 | 100 | 100.0 |
2. The P1-like viruses | ||||
 | Escherichia phage P1 | NC_005856 | 100 | 100.0 |
 | Escherichia phage P7 | AF503408 | Not determined | 87.3 |
PROPOSED GENERA WITHIN THE MYOVIRIDAE | ||||
1. The Bcep781-like viruses | ||||
 | Burkholderia phage Bcep781 | NC_004333 | 100 | 100.0 |
 | Burkholderia phage Bcep43 | NC_005342 | 98 | 95.5 |
 | Burkholderia phage Bcep1 | NC_005263 | 85 | 90.9 |
 | Burkholderia phage BcepNY3 | NC_009604 | 87 | 92.4 |
 | Xanthomonas phage OP2 | NC_007710 | 52 | 50.0 |
2. The BcepMu-like viruses | ||||
 | Burkholderia phage BcepMu | NC_005882 | 100 | 100.0 |
 | Burkholderia phage φE255 | NC_009237 | 89 | 86.8 |
3. The FelixO1-like viruses | ||||
 | Salmonella phage Felix O1 | NC_005282 | 100 | 100.0 |
 | Escherichia phage wV8 | EU877232 | Not determined | 92.4 |
 | Erwinia phage φEa21-4 | NC_011811 | Not determined | 52.7 |
4. The HAP1-like viruses | ||||
 | Halomonas phage φHAP-1 | NC_010342 | 100 | 100.0 |
 | Vibrio phage VP882 | NC_009016 | Not determined | 73.9 |
5. The Bzx1-like viruses | ||||
 | Mycobacterium phage Bzx1 | NC_004687 | 100 | 100.0 |
 | Mycobacterium phage Catera | NC_008207 | 95 | 95.4 |
 | Mycobacterium phage Cali | NC_011271 | 92 | 93.6 |
 | Mycobacterium phage ScottMcG | NC_011269 | 93 | 94.5 |
 | Mycobacterium phage Rizal | NC_011272 | 95 | 95.9 |
 | Mycobacterium phage Spud | NC_011270 | 97 | 98.2 |
 | Mycobacterium phage Myrna | NC_011273 | 39 | 46.3 |
6. The phiCD119-like viruses | ||||
 | Clostridium phage ΦCD119 | NC_007917 | Not determined | 100.0 |
 | Clostridium phage ΦCD2 | NC_009231 | Not determined | 50.6 |
 | Clostridium phage ΦCD27 | NC_011398 | Not determined | 36.7 |
7. The phiKZ-like viruses | ||||
 | Pseudomonas phage φKZ | NC_004629 | 100 | 100.0 |
 | Pseudomonas phage 201φ2-1 | NC_010821 | 50 | 51.0 |
Peripherally related: | ||||
 | Pseudomonas phage EL | NC_007623 | 30 | 21.9 |
8. The PB1-like viruses | ||||
 | Pseudomonas phage PB1 | NC_011810 | Not determined | 100.0 |
 | Pseudomonas phage F8 | NC_007810 | Not determined | 95.7 |
 | Pseudomonas phage LBL3 | NC_011165 | 97 | 89.2 |
 | Pseudomonas phage LMA2 | NC_011166 | 97 | 95.7 |
 | Pseudomonas phage SN | NC_011756 | Not determined | 92.5 |
 | Pseudomonas phage 14-1 | NC_011703 | Not determined | 92.5 |
 | Burkholderia phage BcepF1 | NC_009015 | 44 | 43.0 |
Peripherally related: | ||||
 | Burkholderia phage BcepB1A | NC_005886 | 22 | 24.7 |
PRELIMINARY GROUPINGS AND UNRELATED PHAGES | ||||
(cyanomyoviridae) | ||||
 | Synechococcus S-PM2 | NC_006820 | 100 | 100.0 |
 | Synechococcus Syn9 | NC_008296 | 41 | 41.5 |
 | Prochlorococcus phage P-SSM2 | NC_006883 | 35 | 40.3 |
 | Prochlorococcus phage P-SSM4 | NC_006884 | 35 | 39.8 |
(phage SfV and relatives) | ||||
 | Shigella phage SfV | NC_003444 | 100 | 100.0 |
 | Escherichia phage P27 | NC_003356 | 42 | 43.1 |
Aggregatibacter phage Aaφ23 | NC_004827 | 100 | 100.0 | |
Clostridium phage c-st | NC_007581 | 100 | 100.0 | |
Escherichia phage rV5 | NC_011041 | 100 | 100.0 | |
Escherichia phage P4 | NC_001609 | 100 | 100.0 | |
Escherichia phage φEcoM-GJ1 | NC_010106 | 100 | 100.0 | |
Iodobacteriophage phiPLPE | NC_011142 | 100 | 100.0 | |
Lactobacillus phage Lb338-1 | NC_012530 | 100 | 100 | |
Microcystis phage Ma-LMM01 | NC_008562 | 100 | 100.0 | |
Natrialba phage φCh1 | NC_004084 | 100 | 100.0 | |
Ralstonia phage RSL1 | NC_010811 | 100 | 100.0 | |
Rhodothermus phage RM378 | NC_004735 | 100 | 100.0 | |
Streptococcus phage EJ-1 | NC_005294 | 100 | 100.0 | |
Thermus phage φYS40 | NC_008584 | 100 | 100.0 |