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Table 2 MIRU-VNTR Allelic diversity among the Map isolates.

From: Occurrence of Mycobacterium avium subspecies paratuberculosis across host species and European countries with evidence for transmission between wildlife and domestic ruminants

No. of isolates with specified MIRU copy No.

Locus

0

1

2

3

4

5

6

7

8

9

10

Allelic diversity (h)

292

  

14

47

80

3

2

 

1

  

0.58

10

 

21

126

        

0.24

7

 

10

128

9

       

0.22

3

10

6

131

        

0.2

25

 

2

 

138

 

7

     

0.1

X3

 

6

139

2

       

0.09

47

  

1

142

4

      

0.06

32

        

146

1

 

0.006

  1. The allelic diversity (h) at a locus was calculated as h= 1 - Σx i 2 [n/(n- 1)], where x i is the frequency of the ith allele at the locus, and nthe number of isolates [52, 53].
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BMC Microbiology

ISSN: 1471-2180

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