Table 2 Distributions of bacterial groups on the family level.
% of sequences | number of dogs (n = 5) | |||||
|---|---|---|---|---|---|---|
Family | day 0 | day 14 | day 28 | day 0 | day 14 | day 28 |
Actinomycetaceae | 1.64 | 0.43 | 0.29 | 4 | 4 | 5 |
Aerococcaceae | 1.75 | 0.45 | 0.43 | 4 | 5 | 3 |
Alcaligenaceae | 0.11 | 0.08 | 0.00 | 2 | 2 | 0 |
Bacteroidaceae | 1.70 | 0.07 | 0.43 | 3 | 3 | 2 |
Burkholderiaceae | 0.26 | 0.41 | 0.00 | 1 | 3 | 0 |
Campylobacteraceae | 0.13 | 0.19 | 0.02 | 3 | 1 | 1 |
Cardiobacteriaceae | 0.27 | 0.55 | 0.01 | 3 | 2 | 1 |
Carnobacteriaceae | 0.72 | 0.03 | 0.01 | 3 | 2 | 2 |
Clostridiaceae | 5.47 | 19.46 | 10.72 | 4 | 5 | 5 |
Clostridiales Family XI. Incertae Sedis | 1.07 | 0.53 | 0.11 | 4 | 3 | 4 |
Comamonadaceae | 0.66 | 0.17 | 0.09 | 3 | 4 | 2 |
Coriobacteriaceae | 0.12 | 0.00 | 0.47 | 2 | 0 | 1 |
Corynebacteriaceae | 7.02 | 13.33 | 1.30 | 4 | 5 | 5 |
Deinococcaceae | 0.00 | 0.02 | 0.02 | 0 | 1 | 2 |
Dermabacteraceae | 1.44 | 0.22 | 0.16 | 4 | 3 | 3 |
Desulfobulbaceae | 0.02 | 0.02 | 0.00 | 1 | 1 | 0 |
Desulfomicrobiaceae | 0.03 | 0.01 | 0.21 | 1 | 1 | 2 |
Dietziaceae | 0.10 | 0.71 | 0.00 | 4 | 4 | 0 |
Enterobacteriaceae | 4.65 | 3.64 | 52.66 | 5 | 5 | 5 |
Enterococcaceae | 0.03 | 0.43 | 0.02 | 3 | 5 | 2 |
Erysipelotrichaceae | 0.03 | 0.00 | 0.22 | 3 | 0 | 2 |
Eubacteriaceae | 0.22 | 0.10 | 0.11 | 4 | 3 | 1 |
Flavobacteriaceae | 0.28 | 7.55 | 0.15 | 4 | 4 | 5 |
Flexibacteraceae | 0.01 | 0.23 | 0.04 | 1 | 1 | 1 |
Fusobacteriaceae | 5.39 | 0.48 | 6.30 | 3 | 4 | 3 |
Geobacteraceae | 0.18 | 0.02 | 0.01 | 3 | 1 | 1 |
Helicobacteraceae | 0.57 | 0.04 | 0.00 | 3 | 1 | 0 |
Lachnospiraceae | 0.11 | 0.04 | 0.03 | 3 | 3 | 2 |
Microbacteriaceae | 0.29 | 0.11 | 0.05 | 3 | 3 | 2 |
Micrococcaceae | 0.18 | 0.03 | 0.01 | 3 | 3 | 1 |
Moraxellaceae | 33.66 | 23.23 | 18.42 | 4 | 5 | 5 |
Mycoplasmataceae | 0.03 | 0.00 | 0.22 | 1 | 0 | 2 |
Neisseriaceae | 0.34 | 0.52 | 0.10 | 4 | 4 | 2 |
Nocardiaceae | 0.00 | 0.11 | 0.07 | 0 | 3 | 2 |
Nocardioidaceae | 0.04 | 0.00 | 0.02 | 3 | 0 | 1 |
Pasteurellaceae | 0.72 | 17.95 | 0.74 | 4 | 5 | 5 |
Peptococcaceae | 0.48 | 0.00 | 0.03 | 3 | 0 | 3 |
Peptostreptococcaceae | 0.39 | 0.05 | 0.04 | 4 | 1 | 2 |
Porphyromonadaceae | 1.57 | 0.01 | 1.12 | 4 | 1 | 4 |
Prevotellaceae | 2.09 | 0.04 | 0.00 | 3 | 2 | 0 |
Propionibacteriaceae | 0.15 | 0.80 | 0.06 | 4 | 5 | 2 |
Pseudonocardiaceae | 0.00 | 0.11 | 0.00 | 0 | 3 | 0 |
Rhizobiaceae | 0.00 | 0.17 | 0.01 | 0 | 3 | 1 |
Rhodobacteraceae | 0.05 | 0.25 | 0.07 | 2 | 2 | 1 |
Ruminococcaceae | 0.72 | 0.00 | 0.39 | 3 | 1 | 3 |
Sphingomonadaceae | 3.38 | 0.00 | 0.07 | 3 | 0 | 2 |
Spirochaetaceae | 14.15 | 0.02 | 0.37 | 5 | 2 | 3 |
Staphylococcaceae | 0.14 | 0.06 | 0.14 | 2 | 3 | 4 |
Streptococcaceae | 1.85 | 1.25 | 0.76 | 5 | 4 | 5 |
Streptomycetaceae | 0.22 | 0.00 | 0.00 | 3 | 0 | 0 |
Succinivibrionaceae | 0.16 | 0.00 | 0.29 | 1 | 0 | 3 |
Thermomicrobiaceae | 0.02 | 0.01 | 0.01 | 2 | 1 | 1 |
Veillonellaceae | 0.72 | 0.47 | 0.72 | 4 | 4 | 3 |
Xanthomonadaceae | 0.66 | 1.32 | 0.06 | 4 | 4 | 3 |
other | 4.02 | 4.27 | 2.42 | n/a | n/a | n/a |