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Table 2 Bacterial strains and plasmids used in this study

From: Involvement of RNA-binding protein Hfq in the osmotic-response regulation of invE gene expression in Shigella sonnei

Bacterial strains and plasmids

Genotypes

(references)

E. coli

  

   N3431

rne-3071ts, lacZ43, LAM-, relA1, spoT1 (CGSC#6975)

[36]

S. sonnei

  

   HW383

S. sonnei wild-type strain, (Tcr)

[7]

   HW506

S. sonnei HW383 without pSS120 plasmid (Tcr, non invasive)

[7]

   MS506

HW506 (Tcs)

This study

   MS390

HW383 (Tcs)

[13]

   MS1632

MS390ΔinvE

[11]

   MS2830

MS390ΔcpxR (cpxR: chromosomal activator of virF gene)

[13]

   MS4831

MS390Δhfq

[11]

   MS4841

MS390Δhns (non invasive)

[11]

   MS5400

MS390Δrne 701–892 ::aphA

This study

   MS5512

MS390ΔpinvE::paraBAD

[11]

S. flexneri

  

   2457T

S. flexneri 2a wild-type strain,

[49]

   2457O

2457T carrying mutation in virF gene (non-invasive)

[50]

   MF4835

2457TΔhfq::aphA

[11]

Plasmids

  

   pBAD-invE

PCR-amplified invE gene was cloned into pBAD24 (Apr)

[11]

   pHW848

virF-lacZ translational fusion plasmid (Cmr)

[8]

   pJK1142

invE and ipa-mxi-spa (TTSS) genes encoding plasmid (Kmr)

[4]

   pJK1143

virF-encoding plasmid (Cmr)

[4]

   pJM4320

invE-lacZYA transcriptional fusion in pTH18cs5(Cmr)

[13]

   pJM4321

invE-lacZYA translational fusion in pTH18cs5(Cmr)

[13]

   pTrc99A

IPTG inducible expression plasmid(Apr)

[51]

   pTrc-hfq

PCR-amplified hfq gene was cloned into pTrc99A(Apr)

[11]