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Table 4 Oligonucleotide primers used for plasmid profiling.

From: Assessment of decorin-binding protein A to the infectivity of Borrelia burgdorferi in the murine models of needle and tick infection

Primer

Sequence

Reference

lp54 5'

ATGAGCAAAAAAGTAATTTTAATAT

[55]

lp54 3'

CACTAATTCTTTTTGAATTACTAAT

[55]

cp26 5'

ATGCCTCCAAAAGTGAAGATAAAAA

[55]

cp26 3'

TAGCTTATAATTAAAAATTATTGAT

[55]

cp9 5'

ATGCAAAAAATAAACATAGCTAAAT

[55]

cp9 3'

ATCTTCTTCAAGATATTTTATTATA

[55]

lp17 5'

GTGTATACTGACCCAAGGTCAATTA

[55]

lp17 3'

CAATAATGTGATATTTTTAAGAAAT

[55]

lp25 5'

AAATTAATTTCTTTGATCAACCAAC

This study

lp25 3'

TATATTAAGCTTACTTTGGCTGTCG

This study

lp28-1 5'

GATGCAGAGAAGGCTGCTGCTGCAGTTAGTGC

This study

lp28-1 3'

TATAAGCTTTCATCAGAGAGTCTTATTAACAGCAGTCTCAAC

This study

lp28-2 5'

ATGGCGCTGATTACATTAATTGTCG

[55]

lp28-2 3'

AATCTTGAAGAACCTTGCATCTTTA

[55]

lp28-3 5'

CTGAAAATGAAGGAGAAGCGGGTGG

[55]

lp28-3 3'

TAGGCTAATACCAATTCGTACAAAT

[55]

lp28-4 5'

ATGAAATGCCATATAATTGCAACTA

[55]

lp28-4 3'

AATCCGACAGATCTGGTTTGTCCAG

[55]

lp38 5'

ATGATTATTACCCAAACAACGCCC

This study

lp38 3'

TTTTAAATCCATTTTCACAATATG

This study

lp36 5'

TTCTTATCCCTGACTTTCACTTTTGAGG

This study

lp36 3'

TCCTTTACTTCTATGTTTTTACTTTCCTTGGT

This study

lp5 5'

ATGAATGGAATAATTAACGATACAC

[55]

lp5 3'

AATATTAGGATGAAGATTATAAATT

[55]

lp21 5'

TGTGGTTGCTAAAACCCAAGCGT

This study

lp21 3'

TTGTTTCTAATTGCTCTGAATTGCATCC

This study

Chrom 5'

GATTATCAATCATAATACATCAGC

[55]

Chrom 3'

TCTAAGCAATGACAAACATATTGG

[55]

cp18-1 5'

AGGGGAATGTATTAATTGATAATTCA

This study

cp18-1 3'

AGATTTTTTCAAAACATTTGGCGAT

This study

cp18-2 5'

TCAGAAAGCATACCATTACAAGACAAC

This study

cp18-2 3'

AATAATACCTTTTTCTACGCCCGATA

This study

cp32-1 5'

GTTATAATACCTATTCAAGCAGAAAGG

This study

cp32-1 3'

GCTCCCTTCTAATACTTTTCTATAA

This study

cp32-2 5'

CAAGCGAGTTTATTCCCCTTAAA

This study

cp32-2 3'

ATTCTAATATTGTCCACTTTATGAAAT

This study

cp32-3 5'

ACTTGCAAGAGCACAGGTCTATAATTA

This study

cp32-3 3'

CTTAATACAATTAACGTTTCCAGTATA

This study

cp32-4 5'

GTATAAATGCTTTTGGTTATAAGCACAC

This study

cp32-4 3'

GAAACTCCTTCTCTAACCTTTACATAC

This study

cp32-5 5'

GCCTTATAAGGAACATAGGTTAAAGG

This study

cp32-5 3'

AGATTTCAAGCGCTCCTTCAACAAA

This study

cp32-6 5'

GGTGCTTTAGACACAAGAGATGTG

This study

cp32-6 3'

GAACAAATTTCAGATTTAACATTTATCG

This study

cp32-7 5'

GTCAAATTTAAGCTGTTTTAGCAGTG

This study

cp32-7 3'

TATTTACTAATCTATTTTTCAATTTTTCA

This study