Cell proliferation | Â | Â | Â |
---|---|---|---|
Gene ID | Gene function and name | Log 2 ratio: PAO1-C | PA14-C |
DDB0216882 | Cyclin-dependent kinase regulatory | -0,89 | -0,97 |
DDB0188449 | cdc40, conserved splicing factor | 0,68 | 0,78 |
DDB0205486 | CDK family protein kinase | 0,81 | 0,89 |
DDB0168249 | cdk1, "cyclin-dependent_kinase, p34-cdc2_protein" | -0,78 | -0,83 |
DDB0216532 | cdk10;"putative_CDK_family_protein_kinase | 0,91 | 1,08 |
DDB0185341 | PP-loop family | -0,60 | -0,70 |
DDB0205486 | putative protein serine/threonine kinase, CDK family protein kinase | 0,68 | 0,64 |
DDB0218360 | PhoPQ-activated pathogenicity-related protein | -0,59 | -0,57 |
Cellular biogenesis and organization | Â | Â | |
DDB0189693 | copA, coatomer protein complex alpha subunit | 0,52 | 0,68 |
DDB0216892 | lvsB;"BEACH_domain-containing_protein" | 1,05 | 0,91 |
DDB0202609 | Transport protein particle (TRAPP) | -0,77 | -0,61 |
DDB0187558 | putative mitochondrial import inner membrane translocase | -0,65 | -0,65 |
DDB0186481 | atg9, APG9, "autophagy_protein_9" | -0,88 | -0,77 |
DDB0217942 | Putative Mpv17/PMP22 family | -0,66 | -0,93 |
Energy | Â | Â | |
DDB0217090 | Isocitrate lyase family | -0,80 | -0,84 |
DDB0192001 | ppkA, "poly_P_kinase, polyphosphate_kinase" | -0,65 | -0,51 |
DDB0190821 | sdhB, complex II, iron-sulfur protein (IP) subunit | 0,74 | 0,53 |
DDB0190821 | sdhB;"complex_II,(ubiquinone), succinic_dehydrogenase" | 0,59 | 0,61 |
DDB0167662 | similar to Coenzyme Q9 | -0,71 | -0,72 |
DDB0204006 | AMPK beta-2 chain | 0,52 | 0,73 |
Metabolism | Â | Â | |
DDB0187528 | cysteine dioxygenase | 0,69 | 0,66 |
DDB0185702 | hgd;"homogentisate_1,2-dioxygenase" | 1,05 | 1,10 |
DDB0184361 | Thiamine pyrophosphate enzyme | -0,57 | -0,88 |
DDB0186120 | gshA, "gamma_glutamylcysteine_synthetase, glutamate-cysteine_ligase" | -1,72 | -0,94 |
DDB0167249 | Aldehyde dehydrogenase | -0,77 | -0,94 |
DDB0192169 | alrA;"aldehyde_reductase, aldo-keto_reductase" | -0,54 | -0,88 |
DDB0218652 | alrB;"aldo-keto_reductase" | -0,60 | -0,69 |
DDB0189745 | alrC;"aldo-keto_reductase" | -0,84 | -0,72 |
DDB0186332 | alrE;"aldo-keto_reductase" | -1,23 | -0,99 |
DDB0204015 | D-Lactate dehydrogenase | 0,92 | 0,65 |
DDB0187572 | Endoglucanase_E_like | 0,64 | 0,78 |
DDB0203268 | glgB;"1,4-alpha-glucan_branching_enzyme, branching_enzyme" | 1,02 | 0,85 |
DDB0187562 | glk;glucokinase | 0,69 | 0,56 |
DDB0217973 | Gluconolactonase | 0,85 | 0,82 |
DDB0202855 | Glycoside hydrolase | -1,63 | -1,45 |
DDB0202233 | Glycosyl hydrolase family 7 | -1,26 | -1,38 |
DDB0167594 | Glycosyl hydrolases family | 0,60 | 0,56 |
DDB0204016 | gpt10;"putative_glycophosphotransferase" | -0,69 | -1,11 |
DDB0204037 | Legume lectins beta-chain signature | -0,86 | -1,16 |
DDB0206405 | Mannosyl oligosaccharide glucosidase | -0,80 | -0,68 |
DDB0205896 | NAD-dependent epimerase/dehydratase family protein | -2,12 | -1,73 |
DDB0204752 | Phosphoglycerate mutase family | 0,64 | 0,61 |
DDB0190464 | Predicted kinase related to galactokinase and mevalonate kinase | 0,52 | 1,02 |
DDB0186919 | zinc-containing alcohol dehydrogenase | -2,09 | -1,99 |
DDB0168737 | zinc-containing alcohol dehydrogenase (ADH) | -1,35 | -1,03 |
DDB0169356 | carboxylic ester hydrolase | -1,03 | -0,72 |
DDB0190523 | CAS1;"cycloartenol_synthase" | 0,85 | 0,88 |
DDB0185601 | cutA;"fatty_acid_elongase_3-ketoacyl-CoA_synthase, long_chain_fatty_acid_elongase" | -0,93 | -0,62 |
DDB0188166 | delta-24-sterol methyltransferase | -1,42 | -1,74 |
DDB0186908 | eapA;"alkyl-dihydroxyacetonephosphate_synthase" | 0,72 | 0,81 |
DDB0187604 | enoyl-CoA hydratase/isomerase domain-containing protei | -0,65 | -0,63 |
DDB0205302 | Enoyl-CoA hydratase/isomerase family | -0,64 | -0,68 |
DDB0205157 | fadB, des5-2, "delta_5_fatty_acid_desaturase" | 0,89 | 1,11 |
DDB0190288 | fcsB, fatty acyl-CoA synthetase, long-chain-fatty-acid-CoA ligase | -1,45 | -1,57 |
DDB0191679 | GNS1/SUR4 family | -1,03 | -0,59 |
DDB0205505 | mfeB;"hypothetical_peroxisomal_multifunctional_enzyme_2" | -1,06 | -0,65 |
DDB0191653 | patatin family protein | -2,07 | -1,77 |
DDB0218187 | Perilipin family | -1,35 | -1,04 |
DDB0184443 | Saposin (B) Domains | 0,59 | 0,59 |
DDB0190553 | Similar to sterol-C4-methyl oxidase-like | -0,71 | -0,91 |
DDB0217332 | stearoyl-CoA desaturase | 0,90 | 1,02 |
DDB0206478 | allC;"allantoate_amidinohydrolase, allantoicase" | -1,12 | -1,25 |
DDB0205700 | cysteine desulfurase | -1,31 | -1,26 |
DDB0169540 | MOSC domain | -1,00 | -0,67 |
DDB0187599 | 5 prime nucleotidase family | -0,90 | -0,70 |
DDB0187063 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | -1,83 | -1,41 |
DDB0190860 | adenine phosphoribosyltransferase | -0,98 | -0,75 |
DDB0203073 | adenosine deaminase-related growth factor | -1,35 | -0,74 |
DDB0215237 | ATP:D-ribose_5-phosphotransferase, ribokinase | -0,56 | -0,51 |
DDB0206047 | CTP synthase | -1,01 | -1,20 |
DDB0187738 | Cytidine and deoxycytidylate deaminase zinc-binding region | -0,76 | -0,73 |
DDB0191911 | putative RNA methylase | -1,01 | -1,21 |
DDB0185785 | Putative RNA methylase family | -0,59 | -0,63 |
DDB0219236 | pyrK, cytidylate kinase | -0,98 | -0,71 |
DDB0217423 | rnrB_2, ribonucleotide reductase small subunit | -0,79 | -0,84 |
DDB0215284 | tRNA/rRNA methyltransferase SpoU family protein | -0,77 | -0,93 |
DDB0186269 | Thioredoxin family | -1,41 | -1,91 |
DDB0206431 | FAD binding domain | -1,63 | -1,13 |
DDB0187958 | gchA, "GTP_cyclohydrolase_I" | -0,91 | -0,89 |
DDB0185963 | Oxysterol-binding protein | -0,55 | -0,75 |
DDB0205608 | pks18, putative polyketide synthase | 0,54 | 0,60 |
DDB0168380 | pks5, putative polyketide synthase | 0,57 | 0,99 |
DDB0219613 | stlB, putative polyketide synthase | 0,68 | 1,05 |
DDB0186173 | Histidine acid phosphatase | -0,79 | -0,80 |
DDB0184156 | Acetyltransferase (GNAT) family | 0,81 | 0,78 |
DDB0205937 | Aldehyde dehydrogenase family | 1,02 | 0,81 |
DDB0183800 | dihydrolipoamide_dehydrogenase | -0,60 | -0,57 |
DDB0188526 | FAD binding domain | -1,14 | -0,93 |
DDB0169374 | haloacid dehalogenase-like hydrolase | -1,26 | -1,45 |
DDB0204714 | hemA, ALAS, "5-aminolevulinate_synthase, ALA_synthase" | 1,00 | 0,99 |
DDB0187575 | monooxygenase, FAD-binding | -1,30 | -1,14 |
DDB0203608 | NADH:flavin oxidoreductase/NADH oxidase domain-containing protein | -2,99 | -2,49 |
DDB0186877 | Predicted hydrolases or acyltransferases | -0,70 | -0,83 |
DDB0203708 | Putative dehydrogenase domain | 0,60 | 0,66 |
DDB0186921 | Putative quinone oxidoreductase | -0,68 | -0,80 |
DDB0218378 | selD, selenophosphate synthase | 0,83 | 0,85 |
DDB0219578 | short chain dehydrogenase | -0,56 | -0,76 |
DDB0168766 | short chain dehydrogenase | 0,75 | 0,90 |
DDB0201995 | Short-chain alcohol dehydrogenase | -0,64 | -0,69 |
DDB0191047 | Sucrolytic enzyme/ferredoxin homolog protei | -0,76 | -0,55 |
DDB0205223 | Ubiquinone biosynthesis protein | 1,02 | 0,99 |
Movement | Â | Â | |
DDB0190345 | Actin | -0,62 | -0,64 |
DDB0216677 | tubB;"beta_tubulin" | 0,78 | 0,66 |
Protein targeting | Â | Â | |
DDB0189280 | CLN3 protein;Major Facilitator Superfamily | -1,38 | -0,81 |
DDB0186130 | pigF, phosphatidylinositol glycan, class Fphosphoethanolamine N- methyltransferase family | -1,13 | -1,33 |
DDB0187271 | Protein prenyltransferase, alpha subunit | -0,69 | -0,66 |
DDB0187195 | Ubiquitin family protein | -0,68 | -0,56 |
DDB0217546 | vps13B, vacuolar protein sorting-associated protein | 0,80 | 0,57 |
DDB0205767 | Importin-beta N-terminal domain | -1,39 | -0,91 |
DDB0219696 | CSN3, COP9 signalosome complex subunit 3 | 0,86 | 0,56 |
DDB0188097 | mppB;"mitochondrial_processing_peptidase_beta_subunit" | 0,85 | 0,93 |
DDB0188792 | npl4, nuclear protein localization 4 | -1,46 | -1,26 |
DDB0189322 | Peptidase family M41 | 0,66 | 0,82 |
DDB0204548 | putative E3 ubiquitin ligase | 0,56 | 0,88 |
DDB0203213 | Putative serine protease | 0,57 | 0,64 |
DDB0190305 | RING-finger-containing ubiquitin ligase | -1,71 | -2,23 |
DDB0191910 | sigB, GP63, orfGP63", "leishmanolysin_family_protein, peptidase | -1,44 | -1,19 |
DDB0219558 | usp12, putative ubiquitin carboxyl-terminal hydrolase (UCH) | 0,81 | 0,50 |
DDB0188490 | usp40, putative ubiquitin carboxyl-terminal hydrolase (UCH) | 0,83 | 0,60 |
Signal transduction | Â | Â | |
DDB0167328 | ArfGAP, Arf GTPase activating protein | 0,58 | 0,67 |
DDB0187828 | gacX, RacGAP | 0,62 | 0,52 |
DDB0217797 | gpaG, "G-protein_subunit_alpha_7" | -0,93 | -0,77 |
DDB0205484 | GTPase-activator protein for Ras-like | 0,58 | 0,69 |
DDB0202545 | rabX;"Rab_GTPase" | -0,59 | -0,76 |
DDB0186244 | abkD, AdckB2, "putative_ABC1_family_protein_kinase" | 0,80 | 0,88 |
DDB0217600 | nek3, putative protein serine/threonine kinase | 0,55 | 0,56 |
DDB0203684 | tyrosine kinase-like | 0,53 | 0,56 |
DDB0189806 | vwkA;"protein_serine/threonine_kinase" | -0,77 | -0,67 |
DDB0205355 | Calcineurin-like phosphoesterase | -1,27 | -0,86 |
DDB0218779 | pdsA, "PDE, pde1, pdeA", "cAMP_phosphodiesterase" | 0,79 | 1,40 |
DDB0204820 | rabS;"Rab_GTPase" | -0,80 | -0,87 |
DDB0190872 | NLI interacting factor-like phosphatase | -0,55 | -0,60 |
DDB0185382 | Protein phosphatase 5, catalytic subunit | -0,68 | -0,62 |
DDB0186390 | protein tyrosine phosphatase | -0,85 | -0,74 |
DDB0218065 | ptpB, DdPTPa, "phosphotyrosine_phosphatase_ptp2 | -1,20 | -1,01 |
DDB0189698 | Tyrosine specific protein phosphatases family | -0,76 | -0,89 |
DDB0203756 | G-protein-coupled receptor (GPCR) family protein | 0,69 | 0,99 |
DDB0189216 | gacD, RacGAP | -0,63 | -0,58 |
DDB0217433 | Regulator of G protein signaling | 0,90 | 0,72 |
DDB0169375 | cGMP-specific phosphodiesterase | -0,83 | -0,79 |
DDB0167494 | plbF, PLB, "phospholipase_B-like" | -1,17 | -1,01 |
DDB0168860 | sgkA, "SK, SPHK", "sphingosine_kinase" | -0,97 | -0,79 |
DDB0167227 | Cytochrome b5-like Heme/Steroid binding domain | -0,71 | -1,57 |
DDB0216720 | Tetraspanin family | -0,73 | -0,68 |
Stress response | Â | Â | |
DDB0202483 | AhpC/TSA family | -0,51 | -0,68 |
DDB0203727 | AhpC/TSA family protein. Thioredoxin-like | -1,25 | -1,89 |
DDB0203727 | AhpC/TSA family protein. Thioredoxin-like | -1,11 | -2,00 |
DDB0205904 | AhpC/TSA family protein. Thioredoxin-like | -1,10 | -1,63 |
DDB0168230 | Cytochrome P450 | 0,61 | 0,67 |
DDB0217979 | cytochrome P450 family protein | -1,11 | -1,24 |
DDB0187276 | cytochrome P450 family protein | -0,73 | -0,88 |
DDB0186118 | cytochrome P450 family protein | -0,54 | -0,51 |
DDB0167587 | Glutathione S-transferase | -2,24 | -2,02 |
DDB0218804 | Glutathione S-transferase | -1,07 | -0,86 |
DDB0185602 | putative FMN-dependent NAD(P)H:quinone reductase | -0,66 | -0,93 |
DDB0168563 | putative glutathione S-transferase | -0,64 | -1,23 |
DDB0201962 | Ku70-binding family protein | -0,60 | -0,51 |
DDB0191833 | TFIIH4, "TFIIH_subunit, general_transcription_factor_IIH,_polypeptide_4" | -0,81 | -0,90 |
DDB0204089 | NUDIX hydrolase family | -0,89 | -1,14 |
DDB0185428 | Strictosidine synthase | -1,74 | -1,01 |
DDB0169033 | trap1, Dd-trap1, "TNF_receptor-associated_protein", member of the HSP90 fam | -1,93 | -1,56 |
DDB0188234 | Chaperone clpB | -1,00 | -1,25 |
DDB0192088 | heat shock cognate protein | -0,82 | -0,99 |
DDB0192086 | heat shock protein, 70 kDa heat shock protein | -0,94 | -1,18 |
DDB0169051 | Hsp20/alpha crystallin family | -1,13 | -1,30 |
DDB0169044 | Hsp20/alpha crystallin family | -1,07 | -1,12 |
DDB0169207 | hspG12, heat shock protein Hsp20 domain-containing protein | -0,72 | -0,86 |
Transcription | Â | Â | |
DDB0204405 | CRTF;"transcription_factor" | 0,97 | 1,15 |
DDB0167879 | IWS1 C-terminus | 0,70 | 0,69 |
DDB0205969 | snd1, tudor domain-containing protein | 0,66 | 0,79 |
DDB0188840 | TFIIAL, "transcription_factor_IIA" | -0,79 | -0,55 |
DDB0167865 | ddx52, DEAD/DEAH box helicase | -0,55 | -0,55 |
DDB0184074 | ddx6, DEAD/DEAH box helicase | 0,62 | 0,66 |
DDB0184228 | DEAD/DEAH box helicase | -0,63 | -0,60 |
DDB0206136 | myb domain-containing protein | 0,59 | 0,58 |
DDB0189583 | rpmA;"DNA-dependent_RNA_polymerase" | -1,33 | -1,17 |
DDB0186101 | pwp2, ortholog of H. sapiens and S. cerevisiae PWP2 | -0,80 | -0,88 |
DDB0192008 | rpa2, RNA polymerase I, second largest subunit | -0,98 | -1,13 |
DDB0218008 | rpc4;"putative_RNA_polymerase_III_subunit" | -0,58 | -0,55 |
DDB0216877 | tRNA pseudouridine synthase | -0,56 | -0,65 |
DDB0204724 | DNA helicase TIP49, TBP-interacting protei | 0,63 | 0,64 |
DDB0219410 | pirin-like protein | -0,99 | -0,81 |
Translation | Â | Â | |
DDB0167043 | Ribosomal protein L10 | -0,86 | -1,37 |
DDB0190639 | Fibrillarin | -0,65 | -0,84 |
DDB0184302 | Mitochondrial small ribosomal subunit Rsm22 | -0,70 | -0,72 |
DDB0205674 | MPP10, U3 small nucleolar ribonucleoprotein | -0,77 | -0,66 |
DDB0201601 | mrpl11, S60 ribosomal protein L11, mitochondrial | -0,91 | -1,26 |
DDB0204554 | Ribosomal protein L28 | -0,50 | -0,69 |
DDB0188692 | Ribosomal protein S8e | -0,94 | -0,79 |
DDB0183814 | Ribosomal RNA processing protein 4 | 0,58 | 0,56 |
DDB0188661 | rps9, "rp1024, v12", "40S_ribosomal_protein_S9 | 0,60 | 0,70 |
DDB0219852 | u3 small nucleolar RNA interacting protein 2, putative | -0,75 | -0,63 |
DDB0191852 | eukaryotic translation initiation factor 3 subunit 5 | 0,59 | 0,54 |
DDB0203843 | Eukaryotic translation initiation factor 6 (EIF-6)-like protein | -0,96 | -0,64 |
DDB0189529 | gfm2, mitochondrial translation elongation factor G | -0,59 | -0,50 |
DDB0202851 | NMD3 family | -0,95 | -0,97 |
DDB0168814 | aspartyl-tRNA_synthetase | 0,70 | 0,98 |
Transport | Â | Â | |
DDB0217304 | ABC transporter AbcG17 | -1,58 | -1,44 |
DDB0167281 | ABC transporter mdrA2 | -2,65 | -1,44 |
DDB0167281 | ABC transporter mdrA2 | -2,26 | -1,45 |
DDB0191940 | abcB2;"ABC_transporter_B_family_protein" | 0,87 | 0,93 |
DDB0188931 | abcE1;"RNaseL_inhibitor-like_protein, non-transporter_ABC_protein" | 0,61 | 0,74 |
DDB0189332 | amino acid permease family protein | -0,72 | -0,87 |
DDB0168564 | Amino acid/polyamine transporter | -1,28 | -1,06 |
DDB0190286 | mcfF, Mitochondrial carrier protein | -0,99 | -0,86 |
DDB0216936 | mftA;"carrier_protein_RIM" | -0,91 | -1,05 |
DDB0188529 | nucleoporin family protein | -0,94 | -0,72 |
DDB0189222 | ccsA, copper chaperone for superoxide dismutase | -0,69 | -0,62 |
DDB0205129 | Co/Zn/Cd efflux system component | -0,56 | -0,71 |
DDB0202441 | nhe1, DdNHE1, "Na-H_exchanger, sodium/hydrogen_exchanger" | -0,77 | -0,59 |
DDB0168533 | porA;porin | 0,68 | 0,59 |
DDB0218156 | P-type cation-transporting ATPase | -0,69 | -0,57 |
DDB0189480 | mcfT, mitochondrial substrate carrier family protein | -0,74 | -0,86 |
DDB0202337 | Nodulin, Major Facilitator Superfamily | -0,60 | -0,68 |
DDB0185520 | Nucleoside transporter | -0,53 | -0,56 |
DDB0203447 | Sugar (and other) transporter | 1,01 | 0,71 |
DDB0168979 | Sugar transport proteins signature 1 | -0,78 | -1,28 |
DDB0189650 | sodium/potassium-transporting ATPase alpha chain 2 | -1,48 | -0,81 |
DDB0190036 | Major Facilitator Superfamily | -1,13 | -1,05 |
DDB0205693 | Major Facilitator Superfamily | -1,33 | -1,08 |