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Table 2 Significant ORFs (p value < 1 × 107) with greater than 4-fold significant changes in expression at the stationary phase transition point (4.6 to 5 h).

From: Global transcriptional response of Escherichia coli O157:H7 to growth transitions in glucose minimal medium

Ecs no.

Gene

log2 change in expression

QT cluster

Ecs no.

Gene

log2 change in expression

QT cluster

ECs0034

dapB

-2.63

1

ECs1286

O157

-2.09

1

ECs0035

carA

-4.23

1

ECs1426

mdoG

-2.46

5

ECs0068

araC

2.57

2

ECs1440

pyrC

-2.65

1

ECs0072

tbpA

-2.25

1

ECs1468

plsX

-2.16

1

ECs0083

fruL

-2.06

1

ECs1479

ptsG

-3.09

1

ECs0124

speD

-2.74

1

ECs1492

mfd

-2.33

1

ECs0149

dksA

2.12

2

ECs1604

ycfC

-2.19

1

ECs0150

sfsA

2.83

2

ECs1662

O157

-2.53

1

ECs0191

yaeO

2.42

2

ECs1684

dadA

2.34

2

ECs0207

dniR

-2.11

1

ECs1710

ychH

4.61

2

ECs0334

O157

-2.07

1

ECs1712

prsA

-2.68

1

ECs0374

O157

2.42

2

ECs1859

rnb

-2.70

1

ECs0401

mhpR

4.33

3

ECs1954

O157

-2.61

1

ECs0416

O157

3.55

2

ECs1955

O157

-3.22

1

ECs0468

ribH

-2.27

1

ECs2011

ynbB

2.34

2

ECs0483

cyoD

2.06

10

ECs2021

aldA

3.60

2

ECs0485

cyoB

2.01

10

ECs2027

ydcI

3.35

2

ECs0489

bolA

2.10

2

ECs2031

ydcH

2.99

2

ECs0584

purK

-2.27

1

ECs2037

ydcN

2.71

2

ECs0585

purE

-2.66

1

ECs2083

sfcA

-2.18

1

ECs0610

cusC

-2.31

1

ECs2182

O157

3.21

2

ECs0611

cusF

-2.82

1

ECs2293

ynfE

-2.97

6

ECs0612

cusD

-2.62

1

ECs2296

ynfH

-2.03

6

ECs0613

ybdE

-2.70

1

ECs2362

lhr

-2.16

1

ECs0670

dacA

-2.32

1

ECs2367

purR

-2.51

1

ECs0681

ybeL

2.78

2

ECs2431

yniA

3.52

2

ECs0773

tolR

-2.29

1

ECs2433

yniC

2.44

3

ECs0782

aroG

-3.09

1

ECs2445

osmE

2.33

2

ECs0800

ybhC

-2.13

1

ECs2510

yeaV

2.06

3

ECs0814

O157

-2.15

1

ECs2692

yodD

2.96

2

ECs0869

ybhQ

3.14

2

ECs2714

espJ

-2.01

1

ECs0890

dps

2.64

2

ECs2737

pchC

3.43

2

ECs0943

artJ

-2.81

1

ECs2814

yeeD

-2.09

1

ECs0966

cspD

2.75

2

ECs2816

yeeF

-2.55

1

ECs0968

clpA

2.89

3

ECs2839

O157

-2.23

1

ECs0986

pflB

-2.61

6

ECs2840

wbdP

-2.14

1

ECs1008

ycbB

2.15

2

ECs2847

O157

-2.25

1

ECs1029

pyrD

-2.88

1

ECs3038

yeiT

2.14

3

ECs1037

rmf

2.24

2

ECs3060

fruK

-2.13

1

ECs1072

O157

-2.13

5

ECs3061

fruB

-2.38

1

ECs1091

O157

3.24

2

ECs3136

yfaX

-2.04

1

ECs1137

yccC

-2.27

1

ECs3149

menC

-2.06

1

ECs1138

yccY

-2.78

1

ECs3180

ackA

-2.33

6

ECs1139

yccZ

-2.74

1

ECs3194

argT

4.08

2

ECs3196

purF

-2.94

1

ECs4188

hopD

2.38

2

ECs3197

cvpA

-3.35

1

ECs4192

rpsG

-2.57

1

ECs3212

mepA

-2.29

1

ECs4193

rpsL

-2.67

1

ECs3287

ptsH

-2.66

1

ECs4204

yheT

-2.00

1

ECs3296

cysP

-2.17

1

ECs4249

yhgF

-2.53

1

ECs3361

purM

-4.24

1

ECs4294

yhhA

2.48

2

ECs3387

sseA

2.18

2

ECs4343

nikA

-3.22

1

ECs3403

hcaR

2.50

3

ECs4347

nikE

-2.38

1

ECs3423

purL

-2.45

1

ECs4366

yhiO

4.26

2

ECs3448

trxC

2.24

2

ECs4481

lldP

2.39

2

ECs3463

tyrA

3.67

3

ECs4490

gpmI

-3.35

1

ECs3464

aroF

3.30

3

ECs4512

rpmB

-2.38

1

ECs3471

yfjA

-3.58

1

ECs4553

O157

-2.10

1

ECs3546

emrR

-3.47

1

ECs4575

escC

-2.00

1

ECs3559

srlA_1

2.08

3

ECs4632

yidA

-2.02

1

ECs3595

rpoS

2.80

2

ECs4638

rpmH

-2.47

1

ECs3606

cysD

-2.59

1

ECs4639

rnpA

-2.92

1

ECs3640

pyrG

-2.98

1

ECs4679

atpE

-2.33

1

ECs3659

fucO

2.17

3

ECs4716

rho

-2.56

5

ECs3675

argA

-4.09

1

ECs4720

wecC

-2.34

1

ECs3677

recB

-2.17

1

ECs4741

xerC

-2.08

1

ECs3701

yqeF

2.50

3

ECs4756

yigL

-2.18

1

ECs3743

ygeW

2.08

2

ECs4759

metE

-2.76

1

ECs3749

yqeC

2.45

2

ECs4791

glnL

-2.80

1

ECs3799

O157

-2.69

6

ECs4870

metF

-3.65

1

ECs3800

O157

-2.43

6

ECs4885

ppc

-3.62

1

ECs3802

O157

-2.43

6

ECs4887

argC

-3.99

1

ECs3811

yggG

2.28

2

ECs4888

argB

-3.62

1

ECs3818

metK

-3.03

1

ECs4893

O157

2.09

2

ECs3840

nupG

2.44

2

ECs4907

rplA

-3.02

1

ECs3931

glgS

2.94

2

ECs4908

rplJ

-2.64

1

ECs4052

argG

-2.68

1

ECs4909

rplL

-2.60

1

ECs4103

rpsI

-2.28

1

ECs4929

purH

-4.14

1

ECs4132

yhdG

-2.54

1

ECs4931

metA

-3.78

1

ECs4150

smg

2.24

2

ECs4932

aceB

5.35

2

ECs4156

mscL

2.01

2

ECs5004

O157

2.14

2

ECs4161

rpsD

-2.17

1

ECs5046

yjcD

-3.81

1

ECs4162

rpsK

-2.36

1

ECs5051

acs

5.55

2

ECs4164

rpmJ

-2.03

1

ECs5067

O157

2.21

2

ECs4165

prlA

-2.53

1

ECs5153

purA

-2.06

1

ECs5164

yjfN

4.54

2

ECs5240

yjgR

2.24

2

ECs5192

cysQ

2.01

2

ECs5259

O157

-2.09

1

ECs5231

argI

-3.29

1

ECs5354

rob

2.15

2

ECs5235

valS

-2.58

1

ECs5360

yjjY

2.03

2