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Table 2 Classification of the gene members of the cluster II in Figure 3

From: Comparative transcriptomics in Yersinia pestis: a global view of environmental modulation of gene expression

Gene locus

Gene ID

Description

reference

Category A: Proven

   yfeABCD

YPO2439-2442

Inorganic iron and manganese binding/transport system

[36]

   yfuABC

YPO2958-2960

Inorganic iron transport system

[37]

   ybt locus

YPO1906-1916

Siderophore-dependent Yersiniabactin biosynthesis and transport

[74]

   hmuRSTUV

YPO0279-0283

Heme transport system

[38]

   TonB-exbB-exbD

YPO2193, YPO0682-0683

TonB-ExbB-ExbD complex

[75]

   yiuABCR

YPO1310-1313

Putative siderophore ABC-transporter

[76]

   ysuFJIHG

YPO1528-1532

Siderophore biosynthetic enzyme system

[76]

Category B: Putative

   fitABCD

YPO4022-4025

Putative iron ABC transporter

 

   Others

YPO0778-0776

putative siderophore biosysnthesis protein

 
 

YPO1011-1012

putative TonB-dependent outer membrane receptor

 
 

YPO0956

Putative hydroxamate-type ferri siderophore receptor

 
 

YPO3340

Putative ferric siderophore receptor (pseudogene)

 

Category C: Hypothetical

   sufABCDSE

YPO2399-2404

Fe-S cluster assembly

 

   nrdHIEF

YPO2648-2651

Ribonucleoside-diphosphate reductase

 

   yacK

YPO3409

Putative exported protein

 

   yhhN-zntA

YPO3819-3820

Zinc, lead, cadmium and mercury transporting ATPase

 

   Others

YPO0284

  
 

YPO0988

Putative membrane protein

 
 

YPO1003

Putative exported protein

 
 

YPO1735

Putative ABC transporter (ATP-binding protein)

 
 

YPO1854-1856

Putative membrane or exported protein

 
 

YPO2163

Putative nitroreductase

 
 

YPO3339

Hypothetical protein

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