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Table 1 The GenBank Coordinates of observed Brucella gene differentials. GenBank coordinates of 102 differential open reading frames identified in the three sequenced Brucella species (B. abortus 9-941, B. melitensis 16 M and B. suis 1330) along with their names, sizes and predicted functions.

From: Molecular targets for rapid identification of Brucella spp

B. suis 1330   B. melitensis 16 M B. abortus 9-941   
Chr Gene Name Gene Name Gene Name Gene Size Gene Function
1 BR0221 (232958 .. 233407)   BruAb1_0216 (234314 .. 234763) 450 transcriptional regulator, MerR family
1 BR0389 (397661 .. 397933)   BruAb1_0414 (419791 .. 419519) 273 hypothetical protein
1 BR0390 397923 .. 398030   Not annotated 419781 .. 419888 108 hypothetical protein
1 BR0588 581318 .. 581986   BruAb1_0609 602821 .. 603489 669 protease, putative
1 BR0589 582008 .. 583282   BruAb1_0610 603511 .. 604785 1275 major capsid protein, HK97 family
1 BR0590 583447.. 584013   BruAb1_0611 604950 .. 605516 567 conserved hypothetical protein
1 BR0591 584010 .. 584348   BruAb1_0612 605513 .. 605851 339 conserved hypothetical protein
1 BR0592 584345 .. 584512   BruAb1_0613 605848 .. 606381 168/534 hypothetical protein
1 BR0593 584472 .. 584879   BruAb1_0613 605848 .. 606381 408/534 conserved hypothetical protein
1 BR0952 (924995 .. 925828)    834 amino acid ABC transporter, permease protein
1 BR0953 (925831..926553)    723 amino acid ABC transporter, permease protein
1 BR0954 (926569..926748)    180 hypothetical protein
1 BR1060 (1030564 .. 1031664) BMEI0926 957356 .. 957958   1101/603 multidrug resistance protein A, HlyD family secretion protein
1 BR1057 (1025909 .. 1026703) BMEI0929 961675 .. 962442   795/767 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)
1   BMEI0900 933957..934199 BruAb1_1088 (1071663..1072043) 243/380 hypothetical protein
1 BR1846 (1777721 .. 1778557)    837 hypothetical protein
1 BR1852 1782720 .. 1784648   BruAb1_1831 1799556 .. 1801508 1929/1952 transcriptional regulator, Cro/CI family
1 BR1853 1784645 .. 1785319   BruAb1_1832 1801505 .. 1802179 675 AzlC family protein
1   BMEI1661 (1713088 .. 1713834)   747 recombinase
1   BMEI1674 1724077 .. 1724829 BruAb1_0274 (279593 .. 280345) 753 hypothetical protein
1   BMEI1675 (1724950 .. 1725186) BruAb1_0273 279278 .. 279472 237/194 hypothetical protein
1   BMEI1676 (1725529 .. 1726137) BruAb1_0271 278285 .. 278893 609 hypothetical protein
1   BMEI1677 (1726408 .. 1726872) BruAb1_0270 277475 .. 278014 465/539 hypothetical protein
1   BMEI1678 (1726944 .. 1727234) BruAb1_0269 277188 .. 277478 291 hypothetical protein
1   BMEI1679 (1727300 .. 1727545) BruAb1_0268 276877 .. 277122 246 hypothetical protein
1   BMEI1680 1727623 .. 1727868 BruAb1_0267 (276554 .. 276799) 246 hypothetical protein
1   BMEI1681 1727932 .. 1728408 BruAb1_0266 (276014 .. 276490) 477 hypothetical protein
1   BMEI1682 1728405 .. 1728890 BruAb1_0265 (275532 .. 276017) 470/486 hypothetical protein
1   BMEI1683 (1729275 .. 1729823) BruAb1_0264 274599 .. 275147 549 zinc-dependent metallopeptidase
1   BMEI1684 1729845 .. 1730009 BruAb1_0263 274246 .. 274602 165/357 hypothetical protein
1   BMEI1685 1730353 .. 1730586 BruAb1_0262 (273836 .. 274069) 234 hypothetical protein
1   BMEI1686 (1730670 .. 1731023) BruAb1_0261 273399 .. 273752 354 hypothetical protein
1   BMEI1687 (1731087 .. 1731293) BruAb1_0260 273129 .. 273335 207 hypothetical protein
1   BMEI1688 (1731290 .. 1731880) BruAb1_0259 272653 .. 273132 591/479 hypothetical protein
1   BMEI1689 (1731871 .. 1732350) BruAb1_0258 272071 .. 272550 480 hypothetical protein
1   BMEI1690 (1732392 .. 1732697) BruAb1_0257 271724 .. 272029 306 hypothetical protein
1   BMEI1691 (1732898 .. 1734790) BruAb1_0256 269642 .. 271523 1893/1887 hypothetical membrane spanning protein
1   BMEI1692 (1734940 .. 1736856) BruAb1_0255 267576 .. 269492 1917 flagellar protein FlgJ
1   BMEI1693 (1737057 .. 1737266) BruAb1_0254 267166 .. 267375 210 hypothetical protein
1   BMEI1694 (1737368 .. 1738384) BruAb1_0253 266048 .. 267064 1017 hypothetical protein
1   BMEI1695 (1738538 .. 1739155) BruAb1_0252 265457 .. 265894 618/438 hypothetical protein
1   BMEI1696 (1739125 .. 1740654) BruAb1_0251 263780 .. 265308 1530/1529 hypothetical membrane spanning protein
1   BMEI1697 (1740651 .. 1741532) BruAb1_0250 262902..263783 882 virulence-associated protein E
1   BMEI1698 (1741529 .. 1741843) BruAb1_0249 262591 .. 262905 315 hypothetical protein
1   BMEI1699 (1741840 .. 1742049) BruAb1_0248 262385 .. 262594 210 hypothetical protein
1   BMEI1700 (1742050 .. 1742268) BruAb1_0247 262166 .. 262384 219 hypothetical protein
1   BMEI1701 1742369 .. 1742641 BruAb1_0246 261652 .. 262098 262/446 hypothetical protein
1   BMEI1702 (1742779 .. 1743975) BruAb1_0245 260459 .. 261655 1197 transposase
2 BRA0227 (214967 .. 215674) BMEII1016 1054886 .. 1055593   708 protease I
2 BRA0362 343695 .. 344903    1209 site-specific recombinase, phage integrase family
2 BRA0363 345188 .. 345418    231 DNA-binding protein, putative
2 BRA0364 345499 .. 346557    1059 RepA-related protein
2 BRA0365 (347606 .. 347932)    327 hypothetical protein
2 BRA0366 (347935 .. 349578)    1644 TrbL protein
2 BRA0367 (349581 .. 349763)    183 hypothetical protein
2 BRA0368 (349766 .. 350557)    792 TrbJ protein
2 BRA0369 350655 .. 350807    153 hypothetical protein
2 BRA0370 (350825 .. 351049)    225 hypothetical protein
2 BRA0371 (351052 .. 351270)    219 TraC protein
2 BRA0372 351940 .. 352320    381 TraJ protein
2 BRA0373 352317 .. 354269    953 TraI protein, putative
2 BRA0374 (354676 .. 356100)    1425 hypothetical protein
2 BRA0375 (356254 .. 357279)    1026 hypothetical protein
2 BRA0376 (357313 .. 358038)    726 hypothetical protein
2 BRA0377 (358217 .. 359938)    1722 conserved hypothetical protein
2 BRA0378 (360180 .. 361004)    825 hypothetical protein
2 BRA0379 (361149 .. 361343)    195 DNA-damage-inducible protein J, putative
2 BRA0418 (402846 .. 403826) BMEII0849 885138 .. 885878   981/740 GDP-4-dehydro-d-rhamnose reductase
2 BRA0419 (403810 .. 404880) BMEII0848 884084 .. 885154   1071 GDP-mannose 4,6-dehydratase
2 BRA0420 405144 .. 406394 BMEII0847 (882570 .. 883886)   1250/1317 glycosyltransferase
2 BRA0421 406415 .. 407650 BMEII0846 (881314 .. 882537)   1236/1224 glycosyltransferase, group 1 family protein
2 BRA0422 407647 .. 408843 BMEII0845 (880193 .. 881317)   1197/1125 lipopolysaccharide n-acetylglucosaminyltransferase
2 BRA0423 (408914 .. 409636) BMEII0844 879463 .. 880122   723/660 outer membrane protein, 31 kDa Found in B. neotomae
2 BRA0424 (410033 .. 410647) BMEII0843 878500 .. 879003   615/504 acetyltransferase, CysE/LacA/LpxA/NodL family
2 BRA0425 (410659 .. 411921) BMEII0842 877115 .. 878377   1263 hypothetical protein
2 BRA0426 (411918 .. 412535) BMEII0841 876576 .. 877118   618/543 hypothetical protein
2 BRA0427 (412532 .. 413413) BMEII0840 875548 .. 876504   882/957 glycosyltransferase involved in cell wall biogenesis
2 BRA0428 (413410 .. 414537) BMEII0839 874562 .. 875626   1128/1065 undecaprenyl-phosphate α-n-acetylglucosaminyl transferase
2 BRA0429 414830 .. 416323 BMEII0838 (872719 .. 874224)   1494/1506 succinoglycan biosynthesis transport protein exot
2 BRA0430 416339 .. 417352 BMEII0837 (871690 .. 872703)   1014 glycosyltransferase, group 2 family protein
2 BRA0431 (417308 .. 418549) BMEII0836 870493 .. 871734   1242 dTDP-4-dehydrorhamnose 3,5-epimerase
2 BRA0432 418666 .. 420045 BMEII0835 (868997 .. 869920)   1380/924 glycosyltransferase, group 1 family protein
2 BRA0433 420083 .. 421444 BMEII0834 (867598 .. 868959)   1362 glutamate-1-semialdehyde 2,1-aminomutase
2 BRA0434 421423 .. 422757 BMEII0833 (866285 .. 867619)   1335 conserved hypothetical protein
2 BRA0435 422878 .. 423939 BMEII0832 (865103 .. 866170)   1062/1068 UDP-glucose 4-epimerase
2 BRA0436 423939 .. 425291 BMEII0831 (863751 .. 865064)   1353/1314 conserved hypothetical protein
2 BRA0437 (425254 .. 425778) BMEII0830 863234 .. 863788   525/555 dTDP-4-dehydrorhamnose 3,5-epimerase
2 BRA0438 426099 .. 427400 BMEII0829 (862282 .. 862944)   1302/663 methyltransferase, putative
2 BRA0438 426099 .. 427400 BMEII0828 (861644 .. 862210)   1302/567 possible S-adenosylmethionine-dependent methyltransferase
2 BRA0439 427403 .. 428212 BMEII0827 (860832 .. 861719)   480 glucose-1-phosphate cytidylyltransferase
2 BRA0541 (521842 .. 522066)   BruAb2_0681 692179 .. 692403 225 hypothetical protein
2 BRA0630 (610688 .. 611938)   BruAb2_0596 605152 .. 606402 1251 amino acid dehydrogenase, putative
2 BRA0631 (612027 .. 612788)   BruAb2_0595 604302 .. 605063 762 amino acid ABC transporter
2 BRA0632 (612944 .. 613717)   BruAb2_0594 603373 .. 604146 774 amino acid ABC transporter,
2 BRA0633 (613902 .. 615005)   BruAb2_0593 602085 .. 603188 1104 conserved hypothetical protein
2 BRA0634 615107 .. 615556   BruAb2_0592 (601534 .. 601982) 450 transcriptional regulator, AsnC family
2 BRA0635 615836 .. 617563   BruAb2_0591 (599527 .. 601254) 1728 twin-arginine translocation signal domain protein
2 BRA0636 (617674 .. 618876)   BruAb2_0590 598292 .. 599416 1203/1125 beta-ketoadipyl CoA thiolase
2 BRA0749 731323 .. 732192   BruAb2_0483 (484959 .. 485828) 870 sugar ABC transporter, permease protein, putative
2 BRA0907 888804 .. 890204   BruAb2_0326 (326911 .. 328311) 1401 conserved hypothetical protein
2 BRA1096 1082617 .. 1083330   BruAb2_1035 1037839 .. 1038552 714 transcriptional regulator, putative
2 BRA0553 (532630 .. 534594) BMEII0717 755374 .. 757398   1965/2025 hemagglutinin, cell wall surface protein, putative