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Table 1 Rickettsial strains included in this study

From: Sca 1, a previously undescribed paralog from autotransporter protein-encoding genes in Rickettsia species

Rickettsia species

Strain

sca 1 gene

Sca 1 gene GenBank accession number

Sca 1 488-bp variable fragment GenBank accession number

  

size(bp)

G+C%

  

R. aeschlimannii

MC16

5,193

34.37

AY355353

DQ306900

R. africae

ESF-5

5,561

33.56

AY355350

DQ306901

R. akari

MK (ATCC VR-148T)

4,614

34.09

AY355359

DQ306902

R. australis

Phillips

4,695

34.12

AY355360

DQ306903

R. bellii

369L42-1

1,782

32.1

AY355361

DQ306904

R. canadensis

2678

423, 2,331, and 948 ¶

32.33

AY355367

DQ306905

R. conorii *

Malish7

5,709

33.58

NC_003103

DQ306906

R. felis *

URRWXCal2 (ATCC VR-1525)

5,112

34.64

NC_007109

DQ306907

R. helvetica

C9P9

3,546

34.68

AY355363

DQ306908

R. honei

RB (ATCC VR-599)

5,490

33.77

AY355351

DQ306909

R. japonica

YM

5,928

34.02

AY355352

DQ306910

R. massiliae

Mtu1

5,109

34.41

AY355364

DQ306911

R. montanensis

M/5-6

5,910

34.40

AY355358

DQ306912

R. parkeri

Maculatum20

5,730

33.46

AY355354

DQ306913

R. prowazekii *

Brein1 (ATCC VR-142)

909, 1,884, and 1,044 ¶

30.15

NC_000963

DQ306914

R. rhipicephali

3-7-6

5,439

34.40

AY355365

DQ306915

R. rickettsii

R(Bitterroot) (ATCC VR-891T)

5,601

33.82

AY355355

DQ306916

R. sibirica

246 (ATCC VR-151T)

5,556

33.50

AY355356

DQ306917

R. slovaca

13-B

5,316

33.48

AY355357

DQ306918

R. typhi *

Wilmington (ATCC VR-144)

3,393

30.83

NC_006142

DQ306919

  1. * sca 1 gene sequences were retrieved from complete genome sequences in 4 species.
  2. ¶ For R. prowazekii and R. canadensis, we indicated the size of each of the three fragments of sca 1.