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Table 1 Group specific signature positions for the genus Methanobrevibacter.

From: Comparison of 16S rRNA gene sequences of genus Methanobrevibacter

Group No.

Group Name

No. of sequences used

E. coli position

I

II

III

IV

V

VI

VII

VIII

IX

X

XI

I

Ruminantium

5

637

U

A

A

A/G

A

G

A

G

A

A

G

II

Smithii

7

987

G

A

A

G

G

G

G

G

A

C

G

   

1216

C

U

U

C

C

C

C

C

U

G

C

III

Woesei

2

None

           

IV

Curvatus

7

None

           

V

Arboriphilicus

5

None

           

VI

Filiformis

2

None

           

VII

Termite gut symbiont subgroup I

5

629

A

A

A

A

A

A

G

A

A

A

A

   

820

G

G

G

G

G

G

A

G

G

G

G

   

838

G

G

G

G

G

G

A

G

G

G

G

   

844

A

A

A

A

A

A

U

A

A

A

A

   

1133

G

G/U

G

G

G

G

A

U

G

U

G

   

1140

P1

P/A

P

P

P

P

U

U

P

P

P

VIII

Termite gut symbiont subgroup II2

6

537

G

G

G

G

G

G

G

A

G

G

G

   

554

C

C

C

C

C

C

C

U

C

C

C

   

591

G

A

A

A

A

A

A

U

U

G

A

   

610

C

C

C

C

C

C

C

U

C

C

C

   

627

G

G

G

G

G

G

G

A

G

G

G

IX

Clone LHD12

1

555

U

A

A

C

C

C

C

C

U

U

U

   

611

C

C

U/C

C

C

C

C

C

U

U

C

X

Mbr. wolinii

1

571

A

A

A

A

A

A

A

A

A

G

A

XI

Mbr. acididurans

1

600

C

C

C

U

C

U

U

U

C

U

U

   

827

U

U

U

U

U

U

U

U

U

U

G

  1. 1P = gap 2 Excluding the sequence of Clone Cd30