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Table 1 Viral homologues between subjects and sites

From: Characterization of bacteriophage communities and CRISPR profiles from dental plaque

 

Percent homologous within subject or sample typea

Percent homologous for comparisons of different subjects or sample typesa

P valueb

By subject

   

Subject 1

74.11 ± 5.55

36.52 ± 19.80

0.0122

Subject 2

67.14 ± 3.80

37.76 ± 16.87

0.0432

Subject 3

44.59 ± 6.75

40.26 ± 19.19

0.4461

Subject 4

54.26 ± 6.20

36.37 ± 19.92

0.0511

By sample type

   

Saliva

57.50 ± 8.01

56.94 ± 13.92

0.5339

Plaque

72.94 ± 3.23

61.00 ± 10.00

0.0522

  1. aBased on the mean of 10,000 iterations. 10,000 random reads were sampled per iteration.
  2. bEmpirical p-value based on the fraction of times the estimated percentage of homologous reads for each subject or sample type exceeds that for different subjects or sample types. P-values ≤0.05 or less are highlighted in bold.