Presence (1) or absence (0) of virulence genes | Allelic variants of targeted genes in MLSTa | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Strain no. | Aliases | Serogroup | Serotype | ctxAB | tcpA-R1 | tcpA-R2 | Year | Host | Geographic origin | MLST genotype (GT) | cat | dnaE | gyrB | lap | recA | MSP valueb | Referencec |
080025/EY | Vib12, F 751 | O1 | Ogawa | 1 | 1 | 0 | 1990 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.48 | |
080025/EZ | Vib13, F 752 | O1 | Ogawa | 1 | 1 | 0 | 1990 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.17 | |
080025/FA | Vib14, F 753 | O1 | Ogawa | 1 | 1 | 0 | 1990 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.46 | |
080025/FB | Vib15, F 754 | O1 | Ogawa | 1 | 1 | 0 | 1990 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.30 | |
080025/FC | Vib16, F 755 | O1 | Ogawa | 1 | 1 | 0 | 1990 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.36 | |
080025/FD | Vib17, F 756 | O1 | Ogawa | 1 | 1 | 0 | 1990 | Water | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.19 | |
080025/FE | Vib18, F 758 | O1 | Inaba | 0 | 0 | 0 | 1991 | Water | Spain | 2 | 13 | 0 | 5 | 8 | 12 | 2.38 | |
080025/FF | Vib19, F 759 | O1 | Inaba | 0 | 0 | 0 | 1991 | Water | Spain | 2 | 12 | 0 | 5 | 8 | 12 | 2.22 | |
080025/FG | Vib20, F 760 | O1 | Inaba | 0 | 0 | 0 | 1991 | Water | Spain | 2 | 12 | 0 | 5 | 8 | 12 | 2.22 | |
080025/FH | Vib21, F 761 | O1 | Inaba | 0 | 0 | 0 | 1991 | Prawn | Ecuador | 2 | 12 | 0 | 3 | 9 | 12 | 2.21 | |
080025/FI | Vib22, F 763 | O1 | Inaba | 0 | 0 | 0 | 1991 | Prawn | Ecuador | 2 | 13 | 0 | 3 | 9 | 13 | 2.19 | |
080025/FJ | Vib23, F 762 | O1 | Inaba | 0 | 0 | 0 | 1991 | Prawn | Ecuador | 2 | 12 | 0 | 3 | 9 | 12 | 2.32 | |
080025/FK | Vib24, F 764 | O1 | Inaba | 0 | 0 | 0 | 1991 | Prawn | Ecuador | 2 | 12 | 0 | 3 | 9 | 12 | 2.30 | |
080025/FL | Vib25, F 766 | O1 | Ogawa | 0 | 0 | 0 | 1992 | Water | Spain | 3 | 9 | 8 | 11 | 7 | 8 | 2.37 | |
080025/FM | Vib26, F 768 | O1 | Ogawa | 1 | 1 | 0 | 1992 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.15 | |
080025/FN | Vib27, F 767 | O1 | Ogawa | 1 | 1 | 0 | 1992 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.47 | |
080025/FO | Vib28, F 765 | O1 | Inaba | 0 | 0 | 0 | 1991 | Prawn | Ecuador | 2 | 13 | 0 | 3 | 9 | 12 | 2.25 | |
080025/FP | Vib29 | O1 | Ogawa | 1 | 1 | 0 | 1993 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.18 | [18] |
080025/FQ | Vib30 | O1 | Ogawa | 1 | 1 | 0 | 1993 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.40 | [18] |
080025/FS | Vib32 | O1 | Ogawa | 0 | 0 | 0 | 1994 | Human | Spain | 3 | 9 | 0 | 11 | 7 | 8 | 2.17 | [18] |
080025/FT | Vib33 | O1 | Ogawa | 1 | 1 | 0 | 1994 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.22 | [18] |
080025/FU | Vib34 | O1 | Ogawa | 1 | 1 | 0 | 1994 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.37 | [18] |
080025/FV | Vib35 | O1 | Ogawa | 1 | 1 | 0 | 1994 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.50 | [18] |
080025/FW | Vib36 | O1 | Ogawa | 1 | 1 | 0 | 1995 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.37 | [18] |
080025/FX | Vib37 | O1 | Ogawa | 1 | 1 | 0 | 1995 | Human | Spain | 1 | 1 | 1 | 1 | 1 | 1 | 2.48 | [18] |
080025/GD | Vib43 | O1 | Ogawa | 1 | 1 | 0 | unknown | unknown | 1 | 2 | 1 | 1 | 1 | 2 | 2.37 | [18] | |
080025/GE | Vib44 | O1 | Inaba | 0 | 0 | 1 | unknown | unknown | 3 | 9 | 0 | 11 | 7 | 0 | 2.45 | [18] | |
FFIVC057 | 2/23 | O1 | Ogawa | 1 | 1 | 0 | 1994 | Epidemic | Italy | 1 | 1 | 1 | 1 | 1 | 1 | 2.50 | [20] |
FFIVC058 | 2/26 | O1 | Ogawa | 1 | 1 | 0 | 1994 | Epidemic | Italy | 1 | 1 | 1 | 1 | 1 | 1 | 2.46 | [20] |
FFIVC065 | 2/70 | O1 | Ogawa | 1 | 1 | 0 | 1994 | Epidemic | Albania | 1 | 1 | 1 | 1 | 1 | 1 | 2.51 | [20] |
FFIVC129 | ATCC 33655 | O1 | Hikojima | 1 | 0 | 1 | 1979 | unknown | unknown | 1 | 2 | 1 | 1 | 1 | 2 | 1.99 | [20] |
FFIVC016 | O1 | Ogawa | 1 | 0 | 1 | unknown | unknown | 1 | 2 | 1 | 1 | 1 | 2 | 2.39 | [20] | ||
14/2002/S | O1 | Unknown | 1 | 1 | 0 | unknown | unknown | 1 | 1 | 1 | 1 | 0 | 1 | 2.42 | [20] | ||
FFIVC130 | ATCC51394 | O139 | 1 | 1 | 0 | 1995 | Human | India | 1 | 1 | 1 | 1 | 1 | 1 | 2.37 | [20] | |
FFIVC131 | CDC2412-93 | O139 | 1 | 1 | 0 | 1995 | Human | USA | 1 | 1 | 1 | 1 | 1 | 1 | 2.43 | [20] | |
FFIVC133 | O139 | 1 | 1 | 0 | 2003 | unknown | unknown | 1 | 1 | 1 | 1 | 1 | 1 | 2.49 | [20] | ||
080025/FR | Vib31 | O141 | 1 | 1 | 1 | 1993 | Human | Spain | singleton | 8 | 7 | 3 | 2 | 9 | 2.24 | [18] | |
FFIVC050 | non O1/O139 | 0 | 0 | 0 | Mussels | Norway | singleton | 8 | 9 | 9 | 11 | 5 | 2.28 | [20] | |||
FFIVC084 | non O1/O139 | 0 | 0 | 0 | 2003 | Mussels | Norway | singleton | 4 | 2 | 4 | 3 | 3 | 2.45 | [20] | ||
FFIVC114 | non O1/O139 | 0 | 0 | 0 | 2004 | Water | Norway | 4 | 6 | 1 | 6 | 6 | 6 | 2.29 | [20] | ||
FFIVC115 | non O1/O139 | 0 | 0 | 0 | 2004 | Water | Norway | 4 | 6 | 1 | 6 | 6 | 6 | 2.39 | [20] | ||
FFIVC137 | non O1/O139 | 0 | 0 | 0 | Human | Norway | singleton | 7 | 5 | 8 | 10 | 4 | 2.41 | [20] | |||
2/110/2006 | non O1/O139 | 0 | 0 | 0 | 1998 | Water | Poland | 5 | 10 | 4 | 2 | 12 | 4 | 2.25 | [18] | ||
3/110/2006 | non O1/O139 | 0 | 0 | 0 | 1998 | Water | Poland | 5 | 10 | 4 | 2 | 12 | 4 | 2.42 | [18] | ||
4/110/2006 | non O1/O139 | 0 | 0 | 0 | 2004 | Water | Poland | singleton | 11 | 0 | 13 | 0 | 11 | 2.38 | [18] | ||
14/110/2006 | non O1/O139 | 0 | 0 | 0 | 1998 | Water | Poland | singleton | 5 | 3 | 10 | 4 | 7 | 2.37 | [18] | ||
17/110/2006 | non O1/O139 | 0 | 0 | 0 | 1998 | Water | Poland | 6 | 3 | 6 | 7 | 5 | 10 | 2.47 | [18] | ||
22/110/2006 | non O1/O139 | 0 | 0 | 0 | 2004 | Water | Poland | 6 | 3 | 6 | 7 | 5 | 10 | 2.26 | [18] | ||
070256/J | V. mimicus ATCC 33655 | - | 1 | 0 | 0 | 10 | 14 | 10 | 12 | 1 | 14 | 1.71 | [18] |