Figure 3

sRNA-target interaction network as inferred by the network inference procedure. sRNAs are indicated as diamonds and the targets of the associated sRNAs are indicated in circles. In the picture we show both targets predicted by our analysis (in red, circle or sector) and those present in our current benchmark set (in blue sector or in a circle) to illustrate the extent to which our targets overlap with the benchmark. Targets of the benchmark predicted by Modi et al.[10] are indicated in green (circle or sector). For both Modi et al.[10] and our approach we used those predictions obtained by combining the network-based assignments with the sequence-based predictions.